RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 NEUROG2Q9H2A3 272 aa16.63■□□□□ 0.25
DDR1-269ENST00000512725 EBF2Q9HAK2 575 aa16.63■□□□□ 0.25
DDR1-269ENST00000512725 CYP3A43Q9HB55 503 aa16.63■□□□□ 0.25
DDR1-269ENST00000512725 APOBEC3GQ9HC16 384 aaKnown RBP16.63■□□□□ 0.25
DDR1-269ENST00000512725 STIM2Q9P246 746 aa16.63■□□□□ 0.25
DDR1-269ENST00000512725 SERGEFQ9UGK8 458 aa16.63■□□□□ 0.25
DDR1-269ENST00000512725 CLCA2Q9UQC9 943 aa16.63■□□□□ 0.25
DDR1-269ENST00000512725 FRMD4BQ9Y2L6 1034 aa16.63■□□□□ 0.25
DDR1-269ENST00000512725 CYSRT1A8MQ03 144 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 TBL1XO60907 577 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 SIN3BO75182 1162 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 EPHA8P29322 1005 aaPredicted RBP16.62■□□□□ 0.25
DDR1-269ENST00000512725 CD70P32970 193 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 TKTL1P51854 596 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 EHHADHQ08426 723 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 CUL4BQ13620 913 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 KMT5BQ4FZB7 885 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 ARHGAP40Q5TG30 622 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 BROXQ5VW32 411 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 CNNM4Q6P4Q7 775 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 USP30Q70CQ3 517 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 PIGZQ86VD9 579 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 MMAAQ8IVH4 418 aaKnown RBP16.62■□□□□ 0.25
DDR1-269ENST00000512725 FAM217AQ8IXS0 508 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 WFDC5Q8TCV5 224 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 TMC2Q8TDI7 906 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 EDEM1Q92611 657 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 ULBP1Q9BZM6 244 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 OLA1Q9NTK5 396 aaKnown RBP16.62■□□□□ 0.25
DDR1-269ENST00000512725 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 SCML1Q9UN30 329 aa16.62■□□□□ 0.25
DDR1-269ENST00000512725 ERVH48-1M5A8F1 160 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 WNT9AO14904 365 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 ZBED1O96006 694 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 NR3C1P04150 777 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 GCLMP48507 274 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 NASPP49321 788 aaPredicted RBP16.61■□□□□ 0.25
DDR1-269ENST00000512725 SGSHP51688 502 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 PDE4CQ08493 712 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 TRIP4Q15650 581 aaPredicted RBP16.61■□□□□ 0.25
DDR1-269ENST00000512725 CST6Q15828 149 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 TBC1D25Q3MII6 688 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 ADGRF1Q5T601 910 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 RFWD3Q6PCD5 774 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 GRAMD1CQ8IYS0 662 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 LINC00301Q8NCQ3 95 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 OR2T34Q8NGX1 318 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 OR14C36Q8NHC7 312 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 NIF3L1Q9GZT8 377 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 RSPH9Q9H1X1 276 aaPredicted RBP16.61■□□□□ 0.25
DDR1-269ENST00000512725 EXOC1Q9NV70 894 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 DMAC2Q9NW81 257 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 ZNF462Q96JM2 2506 aa16.61■□□□□ 0.25
DDR1-269ENST00000512725 TENM4Q6N022 2769 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 GOLGA6L7A0A1B0GV03 622 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 PVALEFA0A1B0GWK0 134 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 TLR4O00206 839 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 IKBKBO14920 756 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 MSI1O43347 362 aaKnown RBP16.6■□□□□ 0.25
DDR1-269ENST00000512725 SDC3O75056 442 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 TRIM49P0CI25 452 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 TRIM49CP0CI26 452 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 CKMT2P17540 419 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 PSMD8P48556 350 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 VAMP7P51809 220 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 ZNF445P59923 1031 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 PCSK4Q6UW60 755 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 MFN1Q8IWA4 741 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 TAS1R2Q8TE23 839 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 TSC1Q92574 1164 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
DDR1-269ENST00000512725 BACH2Q9BYV9 841 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 MAGEF1Q9HAY2 307 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 LRRC4Q9HBW1 653 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 CPNE5Q9HCH3 593 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 HBS1LQ9Y450 684 aaKnown RBP16.6■□□□□ 0.25
DDR1-269ENST00000512725 CEP83Q9Y592 693 aa16.6■□□□□ 0.25
DDR1-269ENST00000512725 MORC2Q9Y6X9 1032 aaPredicted RBP16.6■□□□□ 0.25
DDR1-269ENST00000512725 TBC1D3DA0A087WVF3 549 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 TBC1D3IA0A087WXS9 549 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 TBC1D3EA0A087X179 549 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 TBC1D3KA0A087X1G2 549 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 TBC1D3FA6NER0 549 aaPredicted RBP16.59■□□□□ 0.25
DDR1-269ENST00000512725 TBC1D3LB9A6J9 549 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 CUTAO60888 179 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 SLFN14P0C7P3 912 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 TBC1D3HP0C7X1 549 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 SLC8A1P32418 973 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 DAB2P98082 770 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 ILKQ13418 452 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 LY6DQ14210 128 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 KCNJ12Q14500 433 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 TBC1D3GQ6DHY5 549 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 TBC1D3CQ6IPX1 549 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 SHC4Q6S5L8 630 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 SND1Q7KZF4 910 aaKnown RBP eCLIP16.59■□□□□ 0.25
DDR1-269ENST00000512725 ERICH1Q86X53 443 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 TBC1D3Q8IZP1 549 aaPredicted RBP16.59■□□□□ 0.25
DDR1-269ENST00000512725 OXR1Q8N573 874 aa16.59■□□□□ 0.25
DDR1-269ENST00000512725 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms