RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 LURAP1LQ8IV03 231 aa12.74□□□□□ -0.37
DDR1-267ENST00000512336 TTC9Q92623 222 aa12.74□□□□□ -0.37
DDR1-267ENST00000512336 GOLGA1Q92805 767 aa12.74□□□□□ -0.37
DDR1-267ENST00000512336 RSPH9Q9H1X1 276 aaPredicted RBP12.74□□□□□ -0.37
DDR1-267ENST00000512336 FBXL12Q9NXK8 326 aa12.74□□□□□ -0.37
DDR1-267ENST00000512336 GGA2Q9UJY4 613 aa12.74□□□□□ -0.37
DDR1-267ENST00000512336 STRIP2Q9ULQ0 834 aa12.74□□□□□ -0.37
DDR1-267ENST00000512336 PCDHB1Q9Y5F3 818 aa12.74□□□□□ -0.37
DDR1-267ENST00000512336 USP3Q9Y6I4 520 aa12.74□□□□□ -0.37
DDR1-267ENST00000512336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.73□□□□□ -0.37
DDR1-267ENST00000512336 A0A1W2PP55 124 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 TLR4O00206 839 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 MT-CO3P00414 261 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 F13A1P00488 732 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 DLDP09622 509 aaKnown RBP12.73□□□□□ -0.37
DDR1-267ENST00000512336 PABPC1P11940 636 aaKnown RBP12.73□□□□□ -0.37
DDR1-267ENST00000512336 ASPAP45381 313 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 AP3M2P53677 418 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 NXPH1P58417 271 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 ASIC1P78348 528 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 CEBPZQ03701 1054 aaKnown RBP12.73□□□□□ -0.37
DDR1-267ENST00000512336 PDE4CQ08493 712 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 SGSM1Q2NKQ1 1148 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 MBLAC2Q68D91 279 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 RSRC2Q7L4I2 434 aaKnown RBP12.73□□□□□ -0.37
DDR1-267ENST00000512336 KANSL1Q7Z3B3 1105 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 KIAA0907Q7Z7F0 614 aaPredicted RBP12.73□□□□□ -0.37
DDR1-267ENST00000512336 DHX40Q8IX18 779 aaKnown RBP12.73□□□□□ -0.37
DDR1-267ENST00000512336 AHI1Q8N157 1196 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDR1-267ENST00000512336 PARD3BQ8TEW8 1205 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 PLD4Q96BZ4 506 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 HIC2Q96JB3 615 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 TNMDQ9H2S6 317 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 SUN2Q9UH99 717 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 ADAMTS1Q9UHI8 967 aa12.73□□□□□ -0.37
DDR1-267ENST00000512336 UBE4BO95155 1302 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 VPS37CA5D8V6 355 aaPredicted RBP12.72□□□□□ -0.37
DDR1-267ENST00000512336 LRRC72A6NJI9 287 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 MID1O15344 667 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 MPOP05164 745 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 ACP1P24666 158 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 RXRGP48443 463 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 SGSHP51688 502 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 SNRPFP62306 86 aaKnown RBP12.72□□□□□ -0.37
DDR1-267ENST00000512336 CLDN10P78369 228 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 PKP1Q13835 747 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 PROX2Q3B8N5 592 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 C12orf56Q8IXR9 622 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 OR2T34Q8NGX1 318 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 WFDC5Q8TCV5 224 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 SERAC1Q96JX3 654 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 ZNF578Q96N58 590 aaPredicted RBP12.72□□□□□ -0.37
DDR1-267ENST00000512336 NEUROG2Q9H2A3 272 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 SCML1Q9UN30 329 aa12.72□□□□□ -0.37
DDR1-267ENST00000512336 C10orf142B7Z368 130 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 KLK10O43240 276 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 SDC3O75056 442 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 SIN3BO75182 1162 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 RNASEH2AO75792 299 aaKnown RBP12.71□□□□□ -0.37
DDR1-267ENST00000512336 ASS1P00966 412 aaKnown RBP12.71□□□□□ -0.37
DDR1-267ENST00000512336 ATP5BP06576 529 aaKnown RBP12.71□□□□□ -0.37
DDR1-267ENST00000512336 POLR2EP19388 210 aaKnown RBP12.71□□□□□ -0.37
DDR1-267ENST00000512336 TRIM21P19474 475 aaKnown RBP12.71□□□□□ -0.37
DDR1-267ENST00000512336 CD70P32970 193 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 ZNF445P59923 1031 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 YWHAGP61981 247 aaKnown RBP eCLIP12.71□□□□□ -0.37
DDR1-267ENST00000512336 GABREP78334 506 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 DLG4P78352 724 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 EHHADHQ08426 723 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 INCA1Q0VD86 236 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 TRIP4Q15650 581 aaPredicted RBP12.71□□□□□ -0.37
DDR1-267ENST00000512336 CST6Q15828 149 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 ZACNQ401N2 412 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 PPP1R26Q5T8A7 1209 aaPredicted RBP12.71□□□□□ -0.37
DDR1-267ENST00000512336 SPATS2Q86XZ4 545 aaKnown RBP12.71□□□□□ -0.37
DDR1-267ENST00000512336 OXR1Q8N573 874 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 KCNE4Q8WWG9 221 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 TMA16Q96EY4 203 aaKnown RBP12.71□□□□□ -0.37
DDR1-267ENST00000512336 MYO19Q96H55 970 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.71□□□□□ -0.37
DDR1-267ENST00000512336 NT5C1AQ9BXI3 368 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 DUSP16Q9BY84 665 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 LRRC27Q9C0I9 530 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 ERVMER34-1Q9H9K5 563 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 KBTBD4Q9NVX7 518 aa12.71□□□□□ -0.37
DDR1-267ENST00000512336 TRIM38O00635 465 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 SIGLEC6O43699 453 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 RNASEH1O60930 286 aaKnown RBP12.7□□□□□ -0.38
DDR1-267ENST00000512336 LETM1O95202 739 aaPredicted RBP12.7□□□□□ -0.38
DDR1-267ENST00000512336 RPN1P04843 607 aaKnown RBP12.7□□□□□ -0.38
DDR1-267ENST00000512336 CD58P19256 250 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 PIK3CAP42336 1068 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 HARS2P49590 506 aaKnown RBP12.7□□□□□ -0.38
DDR1-267ENST00000512336 CCR5P51681 352 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 E2F1Q01094 437 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 SRSF1Q07955 248 aaKnown RBP eCLIP12.7□□□□□ -0.38
DDR1-267ENST00000512336 VAC14Q08AM6 782 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 SLC45A4Q5BKX6 768 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms