RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CYFIP2Q96F07 1278 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 PBKQ96KB5 322 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 GCNAQ96QF7 691 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 ELOVL4Q9GZR5 314 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 CARD9Q9H257 536 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 IL21Q9HBE4 155 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 NXF1Q9UBU9 619 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 PCDHB8Q9UN66 801 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 ASB3Q9Y575 518 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 SCN1AP35498 2009 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 MYH10P35580 1976 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 OBSL1O75147 1896 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 MTMR11A4FU01 709 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 FAM149AA5PLN7 773 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 GOLGA8CPA6NN73 597 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 BUB1O43683 1085 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 BUB1BO60566 1050 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 ALDH1A2O94788 518 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 CYP11A1P05108 521 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 WEE1P30291 646 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 AVPR1AP37288 418 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 GPD2P43304 727 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 NDST1P52848 882 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 CRY1Q16526 586 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 PPP1R15BQ5SWA1 713 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 ARCQ7LC44 396 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 ITIH5Q86UX2 942 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 RASGEF1CQ8N431 466 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 CPA6Q8N4T0 437 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 C3orf20Q8ND61 904 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 CEP76Q8TAP6 659 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 ZNF564Q8TBZ8 553 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 GIPC2Q8TF65 315 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 KBTBD7Q8WVZ9 684 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 HMGB4Q8WW32 186 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 ZNF653Q96CK0 615 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 TNIP3Q96KP6 325 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 TWNKQ96RR1 684 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 OSBPL9Q96SU4 736 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 ECT2Q9H8V3 914 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 CAPN10Q9HC96 672 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 SEPT11Q9NVA2 429 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 PARVAQ9NVD7 372 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 DNAAF2Q9NVR5 837 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 DKK4Q9UBT3 224 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 CNOT8Q9UFF9 292 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 AMFRQ9UKV5 643 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 MMP17Q9ULZ9 603 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 SNX9Q9Y5X1 595 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 SMG1Q96Q15 3661 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 PLXND1Q9Y4D7 1925 aa10.94□□□□□ -0.66
PDLIM5-217ENST00000512274 HELZ2Q9BYK8 2649 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 MUC22E2RYF6 1773 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 UQCRHLA0A096LP55 91 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 K7EQS6 105 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 M0QZQ0 153 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 CAPN9O14815 690 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 UQCRHP07919 91 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 SYPP08247 313 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 CD58P19256 250 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 ABCB4P21439 1286 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 BRD2P25440 801 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 CTNNA2P26232 953 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 CDC25CP30307 473 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 DPP6P42658 865 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 NOP2P46087 812 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 LHX1P48742 406 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 NAP1L1P55209 391 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 SNX16P57768 344 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 RPL6Q02878 288 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 GPR17Q13304 367 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 ZNF268Q14587 947 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 RPS6KA1Q15418 735 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 PEAR1Q5VY43 1037 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 NAA35Q5VZE5 725 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 TXNDC8Q6A555 127 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 SCARA5Q6ZMJ2 495 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 TMPRSS7Q7RTY8 843 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 PEX26Q7Z412 305 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 DAAM2Q86T65 1068 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 ZDHHC17Q8IUH5 632 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 WDTC1Q8N5D0 677 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 NIPA2Q8N8Q9 360 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 ACTRT1Q8TDG2 376 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 SEPT5Q99719 369 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 NUP85Q9BW27 656 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 PDCL3Q9H2J4 239 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 CLMPQ9H6B4 373 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 OSGEPQ9NPF4 335 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 ZDHHC4Q9NPG8 344 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 TDP1Q9NUW8 608 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 DUS2Q9NX74 493 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 ADAM22Q9P0K1 906 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 CTTNBP2NLQ9P2B4 639 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 DSEQ9UL01 958 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 WNT6Q9Y6F9 365 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 ACACAQ13085 2346 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 TSC2P49815 1807 aa10.93□□□□□ -0.66
PDLIM5-217ENST00000512274 CCDC66A2RUB6 948 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms