RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ARMCX6Q7L4S7 300 aa17.09■□□□□ 0.33
DDX41-213ENST00000512027 PHLDB2Q86SQ0 1253 aa17.09■□□□□ 0.33
DDX41-213ENST00000512027 ADIPOR2Q86V24 386 aa17.09■□□□□ 0.33
DDX41-213ENST00000512027 ERICH1Q86X53 443 aa17.09■□□□□ 0.33
DDX41-213ENST00000512027 MFN1Q8IWA4 741 aa17.09■□□□□ 0.33
DDX41-213ENST00000512027 UCMAQ8WVF2 138 aa17.09■□□□□ 0.33
DDX41-213ENST00000512027 ERGIC2Q96RQ1 377 aa17.09■□□□□ 0.33
DDX41-213ENST00000512027 NAT10Q9H0A0 1025 aaKnown RBP17.09■□□□□ 0.33
DDX41-213ENST00000512027 NYNRINQ9P2P1 1898 aaKnown RBP17.09■□□□□ 0.33
DDX41-213ENST00000512027 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 LRRC10BA6NIK2 292 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 GDF9O60383 454 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 MPLP40238 635 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 STAT1P42224 750 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 GABRB2P47870 512 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 SULT1E1P49888 294 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 ZNF165P49910 485 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 CDR2Q01850 454 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 CREB5Q02930 508 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 LMAN2Q12907 356 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 ENPP2Q13822 863 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 EIF4HQ15056 248 aaKnown RBP17.08■□□□□ 0.32
DDX41-213ENST00000512027 RSPO4Q2I0M5 234 aaPredicted RBP17.08■□□□□ 0.32
DDX41-213ENST00000512027 FSCBQ5H9T9 825 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 MBLAC2Q68D91 279 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 TCEAL6Q6IPX3 200 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 TRNP1Q6NT89 227 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 KIAA1324Q6UXG2 1013 aaKnown RBP17.08■□□□□ 0.32
DDX41-213ENST00000512027 PRR23CQ6ZRP0 262 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 KIAA0907Q7Z7F0 614 aaPredicted RBP17.08■□□□□ 0.32
DDX41-213ENST00000512027 TMEFF1Q8IYR6 380 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 DEFB119Q8N690 84 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.08■□□□□ 0.32
DDX41-213ENST00000512027 ZNF397Q8NF99 534 aaPredicted RBP17.08■□□□□ 0.32
DDX41-213ENST00000512027 TCEAL3Q969E4 200 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 RNF34Q969K3 372 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 C18orf8Q96DM3 657 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 BTN2A3PQ96KV6 586 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 BPIFA3Q9BQP9 254 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 RXFP3Q9NSD7 469 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.08■□□□□ 0.32
DDX41-213ENST00000512027 CYP8B1Q9UNU6 501 aa17.08■□□□□ 0.32
DDX41-213ENST00000512027 ATXN2Q99700 1313 aaKnown RBP17.07■□□□□ 0.32
DDX41-213ENST00000512027 KCNU1A8MYU2 1149 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 M0QYT0 321 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 RHOBTB1O94844 696 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 LSM8O95777 96 aaKnown RBP17.07■□□□□ 0.32
DDX41-213ENST00000512027 EPHX1P07099 455 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 NOS2P35228 1153 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 FLT3P36888 993 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 DHPSP49366 369 aaPredicted RBP17.07■□□□□ 0.32
DDX41-213ENST00000512027 IRAK1P51617 712 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 ATXN1P54253 815 aaKnown RBP17.07■□□□□ 0.32
DDX41-213ENST00000512027 SNX16P57768 344 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 CENPCQ03188 943 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 CSRP2Q16527 193 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 PTPRNQ16849 979 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 KLHL40Q2TBA0 621 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 FNDC3BQ53EP0 1204 aaKnown RBP17.07■□□□□ 0.32
DDX41-213ENST00000512027 MPP7Q5T2T1 576 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 SERPINA13PQ6UXR4 307 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 AHI1Q8N157 1196 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 ATP6V0D2Q8N8Y2 350 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 SLC30A5Q8TAD4 765 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 WFIKKN2Q8TEU8 576 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 LOXL4Q96JB6 756 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 LMLNQ96KR4 655 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 SPACA7Q96KW9 195 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 MRGPRX1Q96LB2 322 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 PCDHB18PQ96TA0 734 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 TBCBQ99426 244 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 NPY6RQ99463 290 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 PRMT1Q99873 361 aaKnown RBP17.07■□□□□ 0.32
DDX41-213ENST00000512027 DDX50Q9BQ39 737 aaKnown RBP17.07■□□□□ 0.32
DDX41-213ENST00000512027 MKRN2Q9H000 416 aaKnown RBP17.07■□□□□ 0.32
DDX41-213ENST00000512027 ANLNQ9NQW6 1124 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 TMPRSS4Q9NRS4 437 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 PIGVQ9NUD9 493 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 INTS6Q9UL03 887 aaKnown RBP17.07■□□□□ 0.32
DDX41-213ENST00000512027 SNX10Q9Y5X0 201 aa17.07■□□□□ 0.32
DDX41-213ENST00000512027 TYW5A2RUC4 315 aaKnown RBP17.06■□□□□ 0.32
DDX41-213ENST00000512027 I6L893 689 aaPredicted RBP17.06■□□□□ 0.32
DDX41-213ENST00000512027 MAP3K13O43283 966 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 LRP3O75074 770 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 LUC7L3O95232 432 aaKnown RBP17.06■□□□□ 0.32
DDX41-213ENST00000512027 GJB6O95452 261 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 CYP1A1P04798 512 aaPredicted RBP17.06■□□□□ 0.32
DDX41-213ENST00000512027 ABCB4P21439 1286 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 CCR1P32246 355 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 MATKP42679 507 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 PTGER3P43115 390 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 CDH18Q13634 790 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 STARD3Q14849 445 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 IQCB1Q15051 598 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 ZDHHC17Q8IUH5 632 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 GPR161Q8N6U8 529 aaKnown RBP17.06■□□□□ 0.32
DDX41-213ENST00000512027 EMC1Q8N766 993 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 FIBINQ8TAL6 211 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 C11orf70Q9BRQ4 267 aa17.06■□□□□ 0.32
DDX41-213ENST00000512027 MTG2Q9H4K7 406 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms