RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 POLR1BQ9H9Y6 1135 aa12.08□□□□□ -0.48
RNF4-216ENST00000511859 THSD1Q9NS62 852 aa12.08□□□□□ -0.48
RNF4-216ENST00000511859 FAM49BQ9NUQ9 324 aa12.08□□□□□ -0.48
RNF4-216ENST00000511859 STRIP2Q9ULQ0 834 aa12.08□□□□□ -0.48
RNF4-216ENST00000511859 PCDHB1Q9Y5F3 818 aa12.08□□□□□ -0.48
RNF4-216ENST00000511859 HEMK1Q9Y5R4 338 aaPredicted RBP12.08□□□□□ -0.48
RNF4-216ENST00000511859 USP3Q9Y6I4 520 aa12.08□□□□□ -0.48
RNF4-216ENST00000511859 NBPF19A0A087WUL8 3843 aa12.08□□□□□ -0.48
RNF4-216ENST00000511859 C10orf142B7Z368 130 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 CLSTN1O94985 981 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 POLR2EP19388 210 aaKnown RBP12.07□□□□□ -0.48
RNF4-216ENST00000511859 ADORA2BP29275 332 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 GABREP78334 506 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 ASIC1P78348 528 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 OVGP1Q12889 678 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 BIRC3Q13489 604 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 NCOA4Q13772 614 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 KCNJ12Q14500 433 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 SGSM1Q2NKQ1 1148 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 HS1BP3Q53T59 392 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 CDCP2Q5VXM1 449 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 MBLAC2Q68D91 279 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 IGF2-ASQ6U949 168 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 BRAPQ7Z569 592 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 IQCHQ86VS3 1027 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 ARHGAP18Q8N392 663 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.07□□□□□ -0.48
RNF4-216ENST00000511859 PLD4Q96BZ4 506 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 TMA16Q96EY4 203 aaKnown RBP12.07□□□□□ -0.48
RNF4-216ENST00000511859 CYFIP2Q96F07 1278 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 OMDQ99983 421 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 SDCBP2Q9H190 292 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 AGPAT3Q9NRZ7 376 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 ABCB8Q9NUT2 735 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 MARCH2Q9P0N8 246 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 GGA2Q9UJY4 613 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 FZD4Q9ULV1 537 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 NOTCH2Q04721 2471 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 LRRK2Q5S007 2527 aa12.07□□□□□ -0.48
RNF4-216ENST00000511859 WNT9AO14904 365 aa12.06□□□□□ -0.48
RNF4-216ENST00000511859 TGFB1I1O43294 461 aa12.06□□□□□ -0.48
RNF4-216ENST00000511859 SIGLEC6O43699 453 aa12.06□□□□□ -0.48
RNF4-216ENST00000511859 USP12O75317 370 aa12.06□□□□□ -0.48
RNF4-216ENST00000511859 PABPC1P11940 636 aaKnown RBP12.06□□□□□ -0.48
RNF4-216ENST00000511859 HARS2P49590 506 aaKnown RBP12.06□□□□□ -0.48
RNF4-216ENST00000511859 DAB2P98082 770 aa12.06□□□□□ -0.48
RNF4-216ENST00000511859 SCARA5Q6ZMJ2 495 aa12.06□□□□□ -0.48
RNF4-216ENST00000511859 JAKMIP2Q96AA8 810 aa12.06□□□□□ -0.48
RNF4-216ENST00000511859 LRRC27Q9C0I9 530 aa12.06□□□□□ -0.48
RNF4-216ENST00000511859 GZF1Q9H116 711 aaPredicted RBP12.06□□□□□ -0.48
RNF4-216ENST00000511859 SRPRBQ9Y5M8 271 aaKnown RBP12.06□□□□□ -0.48
RNF4-216ENST00000511859 A0A1W2PP55 124 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 SLC12A8A0AV02 714 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 CLIC2O15247 247 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 MID1O15344 667 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 RNASEH2AO75792 299 aaKnown RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 C4BPAP04003 597 aaKnown RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 RPN1P04843 607 aaKnown RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 SLFN14P0C7P3 912 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 STAT6P42226 847 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 CYP2J2P51589 502 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 ST8SIA6P61647 398 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 CLDN10P78369 228 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 ARID5BQ14865 1188 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 TRIP4Q15650 581 aaPredicted RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 CST6Q15828 149 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 ZNF574Q6ZN55 896 aaPredicted RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 SND1Q7KZF4 910 aaKnown RBP eCLIP12.05□□□□□ -0.48
RNF4-216ENST00000511859 RSRC2Q7L4I2 434 aaKnown RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 EPM2AIP1Q7L775 607 aaPredicted RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 SPATS2Q86XZ4 545 aaKnown RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 ZNF557Q8N988 423 aaPredicted RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 TAF4BQ92750 862 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 VCPIP1Q96JH7 1222 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 DUSP16Q9BY84 665 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 IRX2Q9BZI1 471 aaPredicted RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 DNAI2Q9GZS0 605 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 ASCL3Q9NQ33 180 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 CGNQ9P2M7 1197 aaKnown RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 STOML2Q9UJZ1 356 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 TARSL2A2RTX5 802 aaKnown RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 TRIM38O00635 465 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 TERTO14746 1132 aaKnown RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 LATO43561 262 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 OPA1O60313 960 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 GP1BAP07359 652 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 GOT1P17174 413 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 GJB2P29033 226 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 SLC8A1P32418 973 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 NUDT1P36639 197 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 NFATC3Q12968 1075 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 KIF26BQ2KJY2 2108 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 HNRNPA1L2Q32P51 320 aaKnown RBP12.05□□□□□ -0.48
RNF4-216ENST00000511859 SGO2Q562F6 1265 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 MPP7Q5T2T1 576 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 ADGRF1Q5T601 910 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 KIAA1614Q5VZ46 1190 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 NAPEPLDQ6IQ20 393 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 CCDC81Q6ZN84 652 aa12.05□□□□□ -0.48
RNF4-216ENST00000511859 ATG14Q6ZNE5 492 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms