RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ITIH6Q6UXX5 1313 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MYH7P12883 1935 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 M0QYV0 167 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 EML1O00423 815 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MTSS1O43312 755 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SLC37A4O43826 429 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ACSL4O60488 711 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TULP3O75386 442 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 POP4O95707 220 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MT-CO3P00414 261 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 HMBSP08397 361 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 FTH1P19P0C7X4 201 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 HNRNPA2B1P22626 353 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 HOXA11P31270 313 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SLC6A4P31645 630 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 P2RY2P41231 377 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 NPY2RP49146 381 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SEMG2Q02383 582 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CEBPZQ03701 1054 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 RING1Q06587 406 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 VAC14Q08AM6 782 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ILF2Q12905 390 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 RCN2Q14257 317 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 GOLGA7BQ2TAP0 167 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ZSCAN23Q3MJ62 389 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 DCAF12L1Q5VU92 463 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 KIAA1211LQ6NV74 962 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ZCCHC8Q6NZY4 707 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SCIMPQ6UWF3 145 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CEACAM20Q6UY09 585 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 C1orf186Q6ZWK4 172 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF720Q7Z2F6 126 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 NELFCDQ8IXH7 590 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TMEFF1Q8IYR6 380 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ANKRD52Q8NB46 1076 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ATP11CQ8NB49 1132 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SLC20A1Q8WUM9 679 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TMEM40Q8WWA1 233 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 WNT8BQ93098 351 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CALR3Q96L12 384 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 GSDMAQ96QA5 445 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 HEPHQ9BQS7 1158 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SELENOOQ9BVL4 669 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TTLL2Q9BWV7 592 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 NLNQ9BYT8 704 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 OSBPL2Q9H1P3 480 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 PCIF1Q9H4Z3 704 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 THAP9Q9H5L6 903 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MARK1Q9P0L2 795 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CNOT8Q9UFF9 292 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 HS3ST3A1Q9Y663 406 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MYH9P35579 1960 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CDK5RAP2Q96SN8 1893 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 BAZ2AQ9UIF9 1905 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 A0A087X0B3 334 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 KRBA1A5PL33 1030 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SYNDIG1LA6NDD5 238 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 RBAK-RBAKDNI3L0D1 243 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 I3L4J1 428 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ERVH48-1M5A8F1 160 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 B4GALT5O43286 388 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 NARSO43776 548 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CACNG3O60359 315 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TBL1XO60907 577 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 MED24O75448 989 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 DDAH2O95865 285 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 HLA-DRAP01903 254 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 LTFP02788 710 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 NR3C1P04150 777 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 HNRNPLP14866 589 aaKnown RBP eCLIP2.93□□□□□ -1.945e-6■■■■□ 19.4
CLOCK-209ENST00000511124 ZFXP17010 805 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 U2AF2P26368 475 aaKnown RBP eCLIP2.93□□□□□ -1.948e-11■■■■□ 22.5
CLOCK-209ENST00000511124 CORO1AP31146 461 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SLC8A1P32418 973 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 NSFP46459 744 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PSMD8P48556 350 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TKTL1P51854 596 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 AIF1P55008 147 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 YBEYP58557 167 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PPARDQ03181 441 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 NR5A1Q13285 461 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SERINC3Q13530 473 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SLC39A14Q15043 492 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TMED2Q15363 201 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 UGCGQ16739 394 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PHKG1Q16816 387 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 DDR2Q16832 855 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 RALGPS1Q5JS13 557 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 LYPLAL1Q5VWZ2 237 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TXNDC8Q6A555 127 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SCARA5Q6ZMJ2 495 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PRICKLE2Q7Z3G6 844 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 FAM124AQ86V42 546 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF677Q86XU0 584 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 GPR135Q8IZ08 494 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PDCL2Q8N4E4 241 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ALLCQ8N6M5 410 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 AGBL5Q8NDL9 886 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 NEK11Q8NG66 645 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms