RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 NKD2Q969F2 451 aaPredicted RBP17.27■□□□□ 0.36
SCAMP1-203ENST00000510030 KRT12Q99456 494 aa17.27■□□□□ 0.36
SCAMP1-203ENST00000510030 SIK2Q9H0K1 926 aa17.27■□□□□ 0.36
SCAMP1-203ENST00000510030 KIF9Q9HAQ2 790 aa17.27■□□□□ 0.36
SCAMP1-203ENST00000510030 SMARCAL1Q9NZC9 954 aa17.27■□□□□ 0.36
SCAMP1-203ENST00000510030 DNMT3BQ9UBC3 853 aaKnown RBP17.27■□□□□ 0.36
SCAMP1-203ENST00000510030 ARHGAP26Q9UNA1 814 aa17.27■□□□□ 0.36
SCAMP1-203ENST00000510030 DRG1Q9Y295 367 aaKnown RBP17.27■□□□□ 0.36
SCAMP1-203ENST00000510030 MRPS23Q9Y3D9 190 aaKnown RBP17.27■□□□□ 0.36
SCAMP1-203ENST00000510030 HELZP42694 1942 aaKnown RBP17.27■□□□□ 0.35
SCAMP1-203ENST00000510030 HACD1B0YJ81 288 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 E9PAM4 449 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 PPP1R12AO14974 1030 aaPredicted RBP17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 ACSL4O60488 711 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 STC2O76061 302 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 ECEL1O95672 775 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 ITGAVP06756 1048 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 COILP38432 576 aaPredicted RBP17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 DYNLT1P63172 113 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 DR1Q01658 176 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 PAFAH1B3Q15102 231 aaKnown RBP17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 NOMO1Q15155 1222 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 SIX1Q15475 284 aaPredicted RBP17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 MS4A13Q5J8X5 152 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 GPR158Q5T848 1215 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 MANEALQ5VSG8 457 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 TXNDC8Q6A555 127 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 CHSY1Q86X52 802 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 LRRC49Q8IUZ0 686 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 KLHL7Q8IXQ5 586 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 PLD5Q8N7P1 536 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 MAB21L3Q8N8X9 362 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 SHKBP1Q8TBC3 707 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 ZNF707Q96C28 371 aaPredicted RBP17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 ZYG11BQ9C0D3 744 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 DDX47Q9H0S4 455 aaKnown RBP17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 STOML2Q9UJZ1 356 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 SH3BP1Q9Y3L3 701 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 HS3ST4Q9Y661 456 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 TRANK1O15050 2925 aa17.26■□□□□ 0.35
SCAMP1-203ENST00000510030 IGLV3-10A0A075B6K4 115 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 LIASO43766 372 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 TCF3P15923 654 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 RHOQP17081 205 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 CORO1AP31146 461 aaKnown RBP17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 STIP1P31948 543 aaKnown RBP17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 CHKAP35790 457 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 VCPP55072 806 aaKnown RBP17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 CYP4F8P98187 520 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 OTUD4Q01804 1114 aaKnown RBP17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 ZNF33AQ06730 810 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 MMRN1Q13201 1228 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 PDK1Q15118 436 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 TCEAL5Q5H9L2 206 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 PRSS36Q5K4E3 855 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 ADGRF1Q5T601 910 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 CES5AQ6NT32 575 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 RWDD4Q6NW29 188 aaKnown RBP17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 GRASPQ7Z6J2 395 aaPredicted RBP17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 CDKL3Q8IVW4 592 aaPredicted RBP17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 CMTM8Q8IZV2 173 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 PYROXD2Q8N2H3 581 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 PQLC3Q8N755 202 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 ARL14EPQ8N8R7 260 aaPredicted RBP17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 ACTL9Q8TC94 416 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 NECAB3Q96P71 396 aaPredicted RBP17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 RNF38Q9H0F5 515 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 UTP11Q9Y3A2 253 aaKnown RBP17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 CPQQ9Y646 472 aa17.25■□□□□ 0.35
SCAMP1-203ENST00000510030 TCRBV7S2A1N4TA0A589 114 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 E2F8A0AVK6 867 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 WASH4PA8MWX3 477 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 MTSS1O43312 755 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 STK10O94804 968 aaKnown RBP17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 HMBSP08397 361 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 ERCC2P18074 760 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 ACTN2P35609 894 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 EIF3EP60228 445 aaKnown RBP17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 TFF2Q03403 129 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 HYAL1Q12794 435 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 AUHQ13825 339 aaKnown RBP17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 TJAP1Q5JTD0 557 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 PIK3R6Q5UE93 754 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 ANKRD54Q6NXT1 300 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 C4orf22Q6V702 233 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 GPR149Q86SP6 731 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 CCDC89Q8N998 374 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 NOA1Q8NC60 698 aaKnown RBP17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 SLC35B2Q8TB61 432 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 CCDC114Q96M63 670 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 FAM129AQ9BZQ8 928 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 IGFLR1Q9H665 355 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 HCFC1R1Q9NWW0 138 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 GDE1Q9NZC3 331 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 ZNF148Q9UQR1 794 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 HEY1Q9Y5J3 304 aa17.24■□□□□ 0.35
SCAMP1-203ENST00000510030 NUP210Q8TEM1 1887 aaPredicted RBP17.23■□□□□ 0.35
SCAMP1-203ENST00000510030 I6L893 689 aaPredicted RBP17.23■□□□□ 0.35
SCAMP1-203ENST00000510030 SLC9A3R1O14745 358 aaPredicted RBP17.23■□□□□ 0.35
SCAMP1-203ENST00000510030 DCLK1O15075 740 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms