RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SCD5Q86SK9 330 aa15.33■□□□□ 0.04
PHF3-209ENST00000509330 FAM126BQ8IXS8 530 aa15.33■□□□□ 0.04
PHF3-209ENST00000509330 TGS1Q96RS0 853 aaKnown RBP15.33■□□□□ 0.04
PHF3-209ENST00000509330 RNF208Q9H0X6 261 aa15.33■□□□□ 0.04
PHF3-209ENST00000509330 PLAC1Q9HBJ0 212 aa15.33■□□□□ 0.04
PHF3-209ENST00000509330 FAM47DPA6NHR8 397 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 TBKBP1A7MCY6 615 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 C2CD2LO14523 706 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 XRCC4Q13426 336 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 PDK1Q15118 436 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 PM20D1Q6GTS8 502 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 DCAKDQ8WVC6 231 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 PKNOX2Q96KN3 472 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 SMYD2Q9NRG4 433 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 NDFIP2Q9NV92 336 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 MPP6Q9NZW5 540 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 GRID1Q9ULK0 1009 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 C5orf60A6NFR6 353 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 MYO1CO00159 1063 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 INHBAP08476 426 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 RPL17P18621 184 aaKnown RBP15.32■□□□□ 0.04
PHF3-209ENST00000509330 SLC11A1P49279 550 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 LIG3P49916 1009 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 SLC1A5Q15758 541 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 MGAT5BQ3V5L5 792 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 RSPO2Q6UXX9 243 aaPredicted RBP15.32■□□□□ 0.04
PHF3-209ENST00000509330 UNC5AQ6ZN44 842 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 TAS1R1Q7RTX1 841 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 VSIG1Q86XK7 387 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 MIB1Q86YT6 1006 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 CACNA2D3Q8IZS8 1091 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 CYTH2Q99418 400 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 EPAS1Q99814 870 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 TSEN34Q9BSV6 310 aaKnown RBP15.32■□□□□ 0.04
PHF3-209ENST00000509330 ADAM28Q9UKQ2 775 aa15.32■□□□□ 0.04
PHF3-209ENST00000509330 CDH23Q9H251 3354 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 PPP1R12AO14974 1030 aaPredicted RBP15.31■□□□□ 0.04
PHF3-209ENST00000509330 MGAT1P26572 445 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 CYP2C18P33260 490 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 CXCR3P49682 368 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 ZBTB17Q13105 803 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 MAPRE1Q15691 268 aaKnown RBP15.31■□□□□ 0.04
PHF3-209ENST00000509330 SPRED3Q2MJR0 410 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 KLHL38Q2WGJ6 581 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 PRSS55Q6UWB4 352 aaPredicted RBP15.31■□□□□ 0.04
PHF3-209ENST00000509330 SLC43A3Q8NBI5 491 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 CENPTQ96BT3 561 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 CRISPLD1Q9H336 500 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 TMEM161AQ9NX61 479 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 TSC2P49815 1807 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 TYMPP19971 482 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 FOXN2P32314 431 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 DNAJC3Q13217 504 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 PRKD1Q15139 912 aaPredicted RBP15.31■□□□□ 0.04
PHF3-209ENST00000509330 GMIPQ9P107 970 aa15.31■□□□□ 0.04
PHF3-209ENST00000509330 RCOR3Q9P2K3 495 aaPredicted RBP15.31■□□□□ 0.04
PHF3-209ENST00000509330 ZNF487B1APH4 448 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 TNFRSF10BO14763 440 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 ZBTB24O43167 697 aaPredicted RBP15.3■□□□□ 0.04
PHF3-209ENST00000509330 PAGE1O75459 146 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 STK10O94804 968 aaKnown RBP15.3■□□□□ 0.04
PHF3-209ENST00000509330 KIAA0754O94854 1291 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 SEMA3BQ13214 749 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 RTP2Q5QGT7 225 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 KDELC2Q7Z4H8 507 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 RIBC1Q8N443 379 aaPredicted RBP15.3■□□□□ 0.04
PHF3-209ENST00000509330 GIPC2Q8TF65 315 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 NTAN1Q96AB6 310 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 SLCO1B3Q9NPD5 702 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 SLC17A7Q9P2U7 560 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 SLC24A2Q9UI40 661 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 SQORQ9Y6N5 450 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 CSH1P0DML2 217 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 CSH2P0DML3 217 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 PTPN3P26045 913 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 FAM189BP81408 668 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 EFEMP1Q12805 493 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 PAFAH1B3Q15102 231 aaKnown RBP15.3■□□□□ 0.04
PHF3-209ENST00000509330 BZW1Q7L1Q6 419 aaKnown RBP15.3■□□□□ 0.04
PHF3-209ENST00000509330 OR52K1Q8NGK4 314 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 SERAC1Q96JX3 654 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 SIGLEC10Q96LC7 697 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 CASD1Q96PB1 797 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 PHF24Q9UPV7 400 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 IRAK2O43187 625 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 F9P00740 461 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 JCHAINP01591 159 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 ADRA1DP25100 572 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 GBP2P32456 591 aaPredicted RBP15.3■□□□□ 0.04
PHF3-209ENST00000509330 ADGRD1Q6QNK2 874 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 TFAP2DQ7Z6R9 452 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 PSTKQ8IV42 348 aaKnown RBP15.3■□□□□ 0.04
PHF3-209ENST00000509330 FCRL2Q96LA5 508 aaPredicted RBP15.3■□□□□ 0.04
PHF3-209ENST00000509330 SLC9A7Q96T83 725 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 ZCWPW1Q9H0M4 648 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 SAMD15Q9P1V8 674 aa15.3■□□□□ 0.04
PHF3-209ENST00000509330 E2F8A0AVK6 867 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 CSPG5O95196 566 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 ALDH2P05091 517 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 BFSP2Q13515 415 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms