RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 MS4A13Q5J8X5 152 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 NADSYN1Q6IA69 706 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 OLFML1Q6UWY5 402 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 ARMCX6Q7L4S7 300 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 SLC26A9Q7LBE3 791 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 CARNMT1Q8N4J0 409 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 PRCCQ92733 491 aaPredicted RBP19.33■□□□□ 0.68
UBE3D-207ENST00000509102 SPAG5Q96R06 1193 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 NAA15Q9BXJ9 866 aaKnown RBP19.33■□□□□ 0.68
UBE3D-207ENST00000509102 NUCKS1Q9H1E3 243 aaKnown RBP19.33■□□□□ 0.68
UBE3D-207ENST00000509102 TMEM51Q9NW97 253 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 COX16Q9P0S2 106 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 MBD1Q9UIS9 605 aaPredicted RBP19.33■□□□□ 0.68
UBE3D-207ENST00000509102 STAP1Q9ULZ2 295 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 CYP8B1Q9UNU6 501 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 THADAQ6YHU6 1953 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 KCNU1A8MYU2 1149 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 H0Y626 953 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 GDF9O60383 454 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 DAB1O75553 588 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 GRAP2O75791 330 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 IGLV3-25P01717 112 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 ERBB2P04626 1255 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 DLDP09622 509 aaKnown RBP19.32■□□□□ 0.68
UBE3D-207ENST00000509102 NOS2P35228 1153 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 SGSHP51688 502 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 PTPN20Q4JDL3 420 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 RABGAP1LQ5R372 815 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 TTC39BQ5VTQ0 682 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-207ENST00000509102 TAF3Q5VWG9 929 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 MBLAC2Q68D91 279 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 SND1Q7KZF4 910 aaKnown RBP eCLIP19.32■□□□□ 0.68
UBE3D-207ENST00000509102 RABEPKQ7Z6M1 372 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 METTL3Q86U44 580 aaKnown RBP19.32■□□□□ 0.68
UBE3D-207ENST00000509102 ERICH1Q86X53 443 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 ZNF677Q86XU0 584 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 SYT12Q8IV01 421 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 LGI2Q8N0V4 545 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 FIBINQ8TAL6 211 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 SORCS1Q8WY21 1168 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 C18orf8Q96DM3 657 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 SIPA1Q96FS4 1042 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 PRICKLE1Q96MT3 831 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-207ENST00000509102 SMOC1Q9H4F8 434 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 FBRSQ9HAH7 460 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 CD248Q9HCU0 757 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 FAM207AQ9NSI2 230 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-207ENST00000509102 PAXBP1Q9Y5B6 917 aa19.32■□□□□ 0.68
UBE3D-207ENST00000509102 IGHV1OR15-9A0A0B4J2B8 117 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 ASLP04424 464 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 TACR2P21452 398 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 PRKCHP24723 683 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 HOXD12P35452 270 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 COPB1P53618 953 aaKnown RBP19.31■□□□□ 0.68
UBE3D-207ENST00000509102 POLR2FP61218 127 aaKnown RBP19.31■□□□□ 0.68
UBE3D-207ENST00000509102 RPS24P62847 133 aaKnown RBP19.31■□□□□ 0.68
UBE3D-207ENST00000509102 NME3Q13232 169 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 RAP1GAP2Q684P5 730 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 TMEM215Q68D42 235 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 RNF43Q68DV7 783 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 DPY19L2P1Q6NXN4 242 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 KIAA0907Q7Z7F0 614 aaPredicted RBP19.31■□□□□ 0.68
UBE3D-207ENST00000509102 ADIPOR2Q86V24 386 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 TMPRSS6Q8IU80 811 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 FRMD1Q8N878 549 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 ZNF397Q8NF99 534 aaPredicted RBP19.31■□□□□ 0.68
UBE3D-207ENST00000509102 CYB5D2Q8WUJ1 264 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 EDEM2Q9BV94 578 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 NUSAP1Q9BXS6 441 aaKnown RBP19.31■□□□□ 0.68
UBE3D-207ENST00000509102 DCHS1Q96JQ0 3298 aa19.31■□□□□ 0.68
UBE3D-207ENST00000509102 ABCA7Q8IZY2 2146 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 PLXND1Q9Y4D7 1925 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 LUC7L3O95232 432 aaKnown RBP19.3■□□□□ 0.68
UBE3D-207ENST00000509102 CD6P30203 668 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 OXTRP30559 389 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 CD70P32970 193 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 CDH5P33151 784 aaPredicted RBP19.3■□□□□ 0.68
UBE3D-207ENST00000509102 SCNN1AP37088 669 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 MATKP42679 507 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 PTGER3P43115 390 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 OXCT1P55809 520 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 LMAN2Q12907 356 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 SYCP2LQ5T4T6 812 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 FAM102AQ5T9C2 384 aaPredicted RBP19.3■□□□□ 0.68
UBE3D-207ENST00000509102 STPG1Q5TH74 334 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 RNF219Q5W0B1 726 aaPredicted RBP19.3■□□□□ 0.68
UBE3D-207ENST00000509102 TCEAL6Q6IPX3 200 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 CFAP52Q8N1V2 620 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 NEK11Q8NG66 645 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 CEP76Q8TAP6 659 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 FOXJ1Q92949 421 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 TCEAL3Q969E4 200 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 PPP1R9BQ96SB3 815 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 SLC6A17Q9H1V8 727 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.3■□□□□ 0.68
UBE3D-207ENST00000509102 KIAA1522Q9P206 1035 aaPredicted RBP19.3■□□□□ 0.68
UBE3D-207ENST00000509102 SUN2Q9UH99 717 aa19.3■□□□□ 0.68
UBE3D-207ENST00000509102 LIMA1Q9UHB6 759 aaKnown RBP19.3■□□□□ 0.68
UBE3D-207ENST00000509102 DCDC2BA2VCK2 349 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 LGALS16A8MUM7 142 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms