RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 FGFR1P11362 822 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 SLC34A1Q06495 639 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 C9orf57Q5W0N0 161 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 LAYNQ6UX15 382 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 RELL1Q8IUW5 271 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 PQLC3Q8N755 202 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMG7-214ENST00000508461 LPPQ93052 612 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 HDAC11Q96DB2 347 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 ZNF570Q96NI8 536 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 PHACTR1Q9C0D0 580 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 LRRC40Q9H9A6 602 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 GBA2Q9HCG7 927 aaPredicted RBP13.22□□□□□ -0.29
SMG7-214ENST00000508461 CHST12Q9NRB3 414 aa13.22□□□□□ -0.29
SMG7-214ENST00000508461 EME2A4GXA9 379 aaPredicted RBP13.21□□□□□ -0.29
SMG7-214ENST00000508461 PEX11AO75192 247 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 POMCP01189 267 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 ITGA2BP08514 1039 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 TPBGLP0DKB5 382 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 ERCC2P18074 760 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 MSX2P35548 267 aaPredicted RBP13.21□□□□□ -0.29
SMG7-214ENST00000508461 GP5P40197 560 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 KCNJ11Q14654 390 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 TNFAIP8L3Q5GJ75 292 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 SH2D4BQ5SQS7 431 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 BTBD8Q5XKL5 378 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 MAGEC3Q8TD91 643 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 ELMO2Q96JJ3 720 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 MARK4Q96L34 752 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 ZMAT2Q96NC0 199 aaKnown RBP13.21□□□□□ -0.29
SMG7-214ENST00000508461 SPC25Q9HBM1 224 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 NMRK1Q9NWW6 199 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 KCNK4Q9NYG8 393 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 PCDHA11Q9Y5I1 949 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 WASF2Q9Y6W5 498 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 CDH5P33151 784 aaPredicted RBP13.21□□□□□ -0.29
SMG7-214ENST00000508461 CA8P35219 290 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 GRIK1P39086 918 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 GRM5P41594 1212 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 CASP2P42575 452 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 PITX1P78337 314 aaPredicted RBP13.21□□□□□ -0.29
SMG7-214ENST00000508461 ARHGAP1Q07960 439 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 GNASQ5JWF2 1037 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 ATPAF2Q8N5M1 289 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 GSTCDQ8NEC7 633 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 TMEM174Q8WUU8 243 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 LRGUKQ96M69 825 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 CDHR5Q9HBB8 845 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 POPDC2Q9HBU9 364 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 DCDC2Q9UHG0 476 aa13.21□□□□□ -0.29
SMG7-214ENST00000508461 SMIM28A0A1B0GU29 152 aa13.21□□□□□ -0.3
SMG7-214ENST00000508461 KLHL2O95198 593 aa13.21□□□□□ -0.3
SMG7-214ENST00000508461 CCNB1P14635 433 aa13.21□□□□□ -0.3
SMG7-214ENST00000508461 NR2C2P49116 596 aa13.21□□□□□ -0.3
SMG7-214ENST00000508461 DLG2Q15700 870 aa13.21□□□□□ -0.3
SMG7-214ENST00000508461 ACSBG2Q5FVE4 666 aa13.21□□□□□ -0.3
SMG7-214ENST00000508461 NAIF1Q69YI7 327 aaPredicted RBP13.21□□□□□ -0.3
SMG7-214ENST00000508461 PACS1Q6VY07 963 aa13.21□□□□□ -0.3
SMG7-214ENST00000508461 RIPOR1Q6ZS17 1223 aa13.21□□□□□ -0.3
SMG7-214ENST00000508461 RAB3IL1Q8TBN0 382 aa13.21□□□□□ -0.3
SMG7-214ENST00000508461 USP13Q92995 863 aaPredicted RBP13.21□□□□□ -0.3
SMG7-214ENST00000508461 VTA1Q9NP79 307 aa13.21□□□□□ -0.3
SMG7-214ENST00000508461 SPDYE5A6NIY4 337 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 BPGMP07738 259 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 CYP3A5P20815 502 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 CERCAMQ5T4B2 595 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 OLFML1Q6UWY5 402 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 AFAP1L2Q8N4X5 818 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 LRRC39Q96DD0 335 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 SYT15Q9BQS2 421 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 SOX13Q9UN79 622 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 A0A0G2JLL6 359 aaPredicted RBP13.2□□□□□ -0.3
SMG7-214ENST00000508461 SERPINE1P05121 402 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 SMIM10L2AP0DMW4 78 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 SMIM10L2BP0DMW5 78 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 PTPN1P18031 435 aaKnown RBP13.2□□□□□ -0.3
SMG7-214ENST00000508461 PGAM1P18669 254 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 PNPLA4P41247 253 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 MRPS35P82673 323 aaKnown RBP13.2□□□□□ -0.3
SMG7-214ENST00000508461 C4orf22Q6V702 233 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 PRRT2Q7Z6L0 340 aaPredicted RBP13.2□□□□□ -0.3
SMG7-214ENST00000508461 GALNT4Q8N4A0 578 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 WDR60Q8WVS4 1066 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 CMTM5Q96DZ9 223 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 MFSD3Q96ES6 412 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 CERS2Q96G23 380 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 NUF2Q9BZD4 464 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 CXCL16Q9H2A7 254 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 RUVBL2Q9Y230 463 aaKnown RBP13.2□□□□□ -0.3
SMG7-214ENST00000508461 MYCP01106 439 aaPredicted RBP13.2□□□□□ -0.3
SMG7-214ENST00000508461 YBX3P16989 372 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■□□□ 12.4
SMG7-214ENST00000508461 L1CAMP32004 1257 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 MATKP42679 507 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 PLK1P53350 603 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 PPIL2Q13356 520 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 MAP3K21Q5TCX8 1036 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 TLK2Q86UE8 772 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 CAND1Q86VP6 1230 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms