RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ZNF670Q9BS34 389 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 TCHPQ9BT92 498 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 TARS2Q9BW92 718 aaKnown RBP5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 NIFKQ9BYG3 293 aaKnown RBP5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 EBF3Q9H4W6 596 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZNF696Q9H7X3 374 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 RAVER2Q9HCJ3 691 aaKnown RBP5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZNF302Q9NR11 478 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 EIF2B3Q9NR50 452 aaKnown RBP5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 RNF146Q9NTX7 359 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 FBXO28Q9NVF7 368 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 ETNK2Q9NVF9 386 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 IRAK4Q9NWZ3 460 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 EPS15L1Q9UBC2 864 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 MORF4L1Q9UBU8 362 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 STK39Q9UEW8 545 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 CDH22Q9UJ99 828 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 VPS28Q9UK41 221 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 USP21Q9UK80 565 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 PPM1HQ9ULR3 514 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 PSMD13Q9UNM6 376 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 DNAJC16Q9Y2G8 782 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 NUMBLQ9Y6R0 609 aa5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 SF3B1O75533 1304 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB3P16-201ENST00000508037 TCRBV7S3A2A0A539 114 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 DYTNA2CJ06 578 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 SLC15A5A6NIM6 579 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 E5RJQ4 531 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 H3BNX3 289 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 MDM4O15151 490 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 B4GALT4O60513 344 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PLIN3O60664 434 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 USP1O94782 785 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 ALDH1A2O94788 518 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 ATG7O95352 703 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 MYCP01106 439 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 MPOP05164 745 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 APRTP07741 180 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 C6orf222P0C671 652 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAM58BPP0C7Q3 252 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAM200BP0CF97 657 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 KITP10721 976 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 VDRP11473 427 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 HARSP12081 509 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 IMPDH2P12268 514 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 COX4I1P13073 169 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 RAG1P15918 1043 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 KCNA2P16389 499 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PGAM1P18669 254 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 NCF2P19878 526 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 DNAJB1P25685 340 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 IL1R2P27930 398 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 ICAM3P32942 547 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 ASPAP45381 313 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 HARS2P49590 506 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 IDH3AP50213 366 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 SERPINB8P50452 374 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 EPHB1P54762 984 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 NR1H2P55055 460 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 MTTPP55157 894 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 HDAC4P56524 1084 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 ABCE1P61221 599 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 TFAMQ00059 246 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PDE1BQ01064 536 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 TNFAIP2Q03169 654 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PTSQ03393 145 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 FOLH1Q04609 750 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 VAC14Q08AM6 782 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 SFSWAPQ12872 951 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PTPRJQ12913 1337 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 SEMA5AQ13591 1074 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 TNFAIP1Q13829 316 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 CCNIQ14094 377 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 UBAP2LQ14157 1087 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 FRG1Q14331 258 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 HERC3Q15034 1050 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 CNGA3Q16281 694 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 TMEM132AQ24JP5 1023 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 SMTNL2Q2TAL5 461 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PTPN20Q4JDL3 420 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PABPC1LQ4VXU2 614 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 MDH1BQ5I0G3 518 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 KCNT1Q5JUK3 1230 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAM102AQ5T9C2 384 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 TEDDM1Q5T9Z0 273 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 IER5Q5VY09 327 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 SLC9A4Q6AI14 798 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 TXNRD3NBQ6F5E7 133 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 C1orf228Q6PIY5 440 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 UGT2A3Q6UWM9 527 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 UNC5AQ6ZN44 842 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 RFX8Q6ZV50 586 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 TRMT1LQ7Z2T5 733 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 KBTBD6Q86V97 674 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZDHHC17Q8IUH5 632 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 CROCCP3Q8IVE0 287 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 DEFB107AQ8IZN7 70 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PQLC1Q8N2U9 271 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 WDTC1Q8N5D0 677 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PLD5Q8N7P1 536 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms