RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ARRDC3Q96B67 414 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 SARAFQ96BY9 339 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 DAZAP1Q96EP5 407 aaKnown RBP3.88□□□□□ -1.79
LSM6-205ENST00000507449 NPAS1Q99742 590 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 REEP2Q9BRK0 252 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 ADGRE3Q9BY15 652 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 RNF26Q9BY78 433 aaPredicted RBP3.88□□□□□ -1.79
LSM6-205ENST00000507449 PCED1AQ9H1Q7 454 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 CPNE5Q9HCH3 593 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 WASH6PQ9NQA3 447 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 TLR8Q9NR97 1041 aaKnown RBP3.88□□□□□ -1.79
LSM6-205ENST00000507449 SH3BP4Q9P0V3 963 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 SLC17A6Q9P2U8 582 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 PI4KBQ9UBF8 816 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 ZNF69Q9UC07 566 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 RRP7AQ9Y3A4 280 aaKnown RBP3.88□□□□□ -1.79
LSM6-205ENST00000507449 DMRT1Q9Y5R6 373 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 SPATA31A1Q5TZJ5 1347 aa3.88□□□□□ -1.79
LSM6-205ENST00000507449 RAMP2O60895 175 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 JTBO76095 146 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 SLPIP03973 132 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 ALDOAP04075 364 aaKnown RBP3.87□□□□□ -1.79
LSM6-205ENST00000507449 RFPL3SP0C7P2 107 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 CD53P19397 219 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 SLC8A1P32418 973 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 HOXD12P35452 270 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 IDUAP35475 653 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 LIFRP42702 1097 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 ZNF84P51523 738 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 SLC37A1P57057 533 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 SHC2P98077 582 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 TLE2Q04725 743 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 DMWDQ09019 674 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 FHL2Q14192 279 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 DLGAP5Q15398 846 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 SEC23BQ15437 767 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 CNGA3Q16281 694 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 FAM153CQ494X1 144 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 CTXN3Q4LDR2 81 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 INTS11Q5TA45 600 aaKnown RBP3.87□□□□□ -1.79
LSM6-205ENST00000507449 SLC39A5Q6ZMH5 540 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 RINLQ6ZS11 566 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 RTL10Q7L3V2 364 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 TFAP2DQ7Z6R9 452 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 HTRA1Q92743 480 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 RITA1Q96K30 269 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 GPR78Q96P69 363 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 PIGSQ96S52 555 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 AGAP2Q99490 1192 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 DUSP26Q9BV47 211 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 PDE11AQ9HCR9 933 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 SLC22A11Q9NSA0 550 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 TMLHEQ9NVH6 421 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 MTMR4Q9NYA4 1195 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 ARPP21Q9UBL0 812 aaPredicted RBP3.87□□□□□ -1.79
LSM6-205ENST00000507449 TLK1Q9UKI8 766 aa3.87□□□□□ -1.79
LSM6-205ENST00000507449 C3orf70A6NLC5 250 aaPredicted RBP3.86□□□□□ -1.79
LSM6-205ENST00000507449 BTBD19C9JJ37 291 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 RRHO14718 337 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 KLK10O43240 276 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 HNRNPRO43390 633 aaKnown RBP3.86□□□□□ -1.79
LSM6-205ENST00000507449 WDHD1O75717 1129 aaPredicted RBP3.86□□□□□ -1.79
LSM6-205ENST00000507449 AVPR2P30518 371 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 PNPLA4P41247 253 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 SOX10P56693 466 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 B4GALNT1Q00973 533 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 TFF2Q03403 129 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 CDK18Q07002 472 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 DPTQ07507 201 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 ATG16L1Q676U5 607 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 TMEM65Q6PI78 240 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 RFX6Q8HWS3 928 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 PAF1Q8N7H5 531 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 FSIP1Q8NA03 581 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 NAXEQ8NCW5 288 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 CAGE1Q8TC20 777 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 ATP2A3Q93084 1043 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 RBM17Q96I25 401 aaKnown RBP3.86□□□□□ -1.79
LSM6-205ENST00000507449 ZNF845Q96IR2 970 aaPredicted RBP3.86□□□□□ -1.79
LSM6-205ENST00000507449 HIC2Q96JB3 615 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 PPM1MQ96MI6 270 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 HS6ST2Q96MM7 605 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 NAP1L4Q99733 375 aaKnown RBP3.86□□□□□ -1.79
LSM6-205ENST00000507449 PHF7Q9BWX1 381 aaPredicted RBP3.86□□□□□ -1.79
LSM6-205ENST00000507449 CLPBQ9H078 707 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 IL21RQ9HBE5 538 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 NOD2Q9HC29 1040 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 MLXIPLQ9NP71 852 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 UBN1Q9NPG3 1134 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 SEMA4GQ9NTN9 838 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 ASNSD1Q9NWL6 643 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 TFCP2L1Q9NZI6 479 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 BAG5Q9UL15 447 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 AOX1Q06278 1338 aa3.86□□□□□ -1.79
LSM6-205ENST00000507449 NPIPB13A6NJU9 1138 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 LRRC3CA6NJW4 275 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 A6NLC8 198 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 NPIPB5A8MRT5 1133 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 NPIPB4C9JG80 1138 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 J3KRW8 73 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms