RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 TRIM16O95361 564 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 FYNP06241 537 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 ATP5BP06576 529 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 DLDP09622 509 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 POLR2EP19388 210 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 ACSL1P33121 698 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 MATKP42679 507 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 STX17P56962 302 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 RPS14P62263 151 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 BNC1Q01954 994 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 GCNT1Q02742 428 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 MORC3Q14149 939 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 TRIP6Q15654 476 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 ZNF423Q2M1K9 1284 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 MPP7Q5T2T1 576 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 FOXR2Q6PJQ5 311 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 MFN1Q8IWA4 741 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 TRIM59Q8IWR1 403 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 CHCHD4Q8N4Q1 142 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 HJURPQ8NCD3 748 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 EHBP1Q8NDI1 1231 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 DQX1Q8TE96 717 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 FAM149B1Q96BN6 582 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 MYEOVQ96EZ4 313 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 SERPINB11Q96P15 392 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 IRX2Q9BZI1 471 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 INTS2Q9H0H0 1204 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 PCED1AQ9H1Q7 454 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 MTG2Q9H4K7 406 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 GAREM1Q9H706 876 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 FBRSQ9HAH7 460 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 ST7Q9NRC1 585 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 RALYQ9UKM9 306 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 PCDHB9Q9Y5E1 797 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 SLCO1B1Q9Y6L6 691 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 IGF2RP11717 2491 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 PLXNB3Q9ULL4 1909 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 A0A1B0GVT2 93 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 SEMA4FO95754 770 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 CER1O95813 267 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 MOCS2O96007 188 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 AFPP02771 609 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 DNTTP04053 509 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 FTH1P19P0C7X4 201 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 C7P10643 843 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 KRT5P13647 590 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 GPD2P43304 727 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 RPS24P62847 133 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 KCNH2Q12809 1159 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 PAK1Q13153 545 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 DENND1BQ6P3S1 775 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 RAB44Q7Z6P3 723 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 TAC4Q86UU9 113 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 SCUBE3Q8IX30 993 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 CARNMT1Q8N4J0 409 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 ZNF557Q8N988 423 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 C1orf216Q8TAB5 229 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 ADAM32Q8TC27 787 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 AZIN2Q96A70 460 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 LMLNQ96KR4 655 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 DDX50Q9BQ39 737 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 NUCKS1Q9H1E3 243 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 NAALADL1Q9UQQ1 740 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 TLR6Q9Y2C9 796 aa11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 FNDC3AQ9Y2H6 1198 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.98□□□□□ -0.49
HMGCS1-204ENST00000507293 TYW5A2RUC4 315 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 SART1O43290 800 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 GNA14O95837 355 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 ZNF883P0CG24 379 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 CSKP41240 450 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 RPL34P49207 117 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 CSNK1EP49674 416 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 MARSP56192 900 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 ZBTB16Q05516 673 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 CDH18Q13634 790 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 HLA-BQ31612 363 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 TTC31Q49AM3 519 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 MS4A13Q5J8X5 152 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 ZNF776Q68DI1 518 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 IL27RAQ6UWB1 636 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 CFAP52Q8N1V2 620 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 FIBINQ8TAL6 211 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 SETD7Q8WTS6 366 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 TTC17Q96AE7 1141 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 BIRC7Q96CA5 298 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 MYO19Q96H55 970 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 SLC39A13Q96H72 371 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 SRRTQ9BXP5 876 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 BTBD1Q9H0C5 482 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 TM7SF3Q9NS93 570 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 SUN2Q9UH99 717 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 XPO7Q9UIA9 1087 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 PCOLCE2Q9UKZ9 415 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 INTS6Q9UL03 887 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 CNTN6Q9UQ52 1028 aa11.97□□□□□ -0.49
HMGCS1-204ENST00000507293 FRYQ5TBA9 3013 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 FAM221BA6H8Z2 402 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 SRRM3A6NNA2 597 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms