RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FBXO39Q8N4B4 442 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 MYCT1Q8N699 235 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 LRRC52Q8N7C0 313 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 OR6B3Q8NGW1 331 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 NOC3LQ8WTT2 800 aaKnown RBP7.57□□□□□ -1.2
VCAN-207ENST00000507162 DDI1Q8WTU0 396 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 KBTBD7Q8WVZ9 684 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 WASF1Q92558 559 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 KLHDC7BQ96G42 594 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 PLIN2Q99541 437 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 MED10Q9BTT4 135 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 SLC4A5Q9BY07 1137 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 TMEM245Q9H330 911 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 FBRSQ9HAH7 460 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 LARSQ9P2J5 1176 aaKnown RBP7.57□□□□□ -1.2
VCAN-207ENST00000507162 VPS4AQ9UN37 437 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 CA5BQ9Y2D0 317 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 LRRK1Q38SD2 2015 aa7.57□□□□□ -1.2
VCAN-207ENST00000507162 CCDC168Q8NDH2 2452 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 RP1P56715 2156 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 PLXNA2O75051 1894 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 PP2D1A8MPX8 630 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 PLD2O14939 933 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 MID1O15344 667 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 RNASEH1O60930 286 aaKnown RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 SEMA7AO75326 666 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 NEBLO76041 1014 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 PENKP01210 267 aaPredicted RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 LIPCP11150 499 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 RARGP13631 454 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 CHKAP35790 457 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 SLC5A3P53794 718 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 NCKAP1LP55160 1127 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 WNT7BP56706 349 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 EHHADHQ08426 723 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 ZNF177Q13360 481 aaPredicted RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 C1QL3Q5VWW1 255 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 KRT79Q5XKE5 535 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 SLFN12LQ6IEE8 588 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 CRELD2Q6UXH1 353 aaPredicted RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 Q6ZNB5 142 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 CHST9Q7L1S5 443 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 DPH6Q7L8W6 267 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 MAMDC2Q7Z304 686 aaPredicted RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 ZFAND4Q86XD8 727 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 NT5DC4Q86YG4 428 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 DIS3L2Q8IYB7 885 aaKnown RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 RBBP8NLQ8NC74 664 aaPredicted RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 C9orf43Q8TAL5 461 aaPredicted RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 JPH3Q8WXH2 748 aaPredicted RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 POMGNT1Q8WZA1 660 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 HPDLQ96IR7 371 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 MRPL45Q9BRJ2 306 aaKnown RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 FAM213AQ9BRX8 229 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 B3GNT5Q9BYG0 378 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 ELOVL4Q9GZR5 314 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 ZHX3Q9H4I2 956 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 EPB41L5Q9HCM4 733 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 TLR8Q9NR97 1041 aaKnown RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 SCML1Q9UN30 329 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 PCDHB11Q9Y5F2 797 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 PCDHGA7Q9Y5G6 932 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 SPENQ96T58 3664 aaKnown RBP7.56□□□□□ -1.2
VCAN-207ENST00000507162 APCP25054 2843 aa7.56□□□□□ -1.2
VCAN-207ENST00000507162 TP53BP1Q12888 1972 aaPredicted RBP7.55□□□□□ -1.2
VCAN-207ENST00000507162 ABCA2Q9BZC7 2435 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 LY6G6EA0A0G2JKS1 128 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 NEMP2A6NFY4 417 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 K7ESM1 405 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 CASC3O15234 703 aaKnown RBP7.55□□□□□ -1.2
VCAN-207ENST00000507162 KLKB1P03952 638 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 ZDHHC11BP0C7U3 371 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 GIMD1P0DJR0 217 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 HGFP14210 728 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 WARSP23381 471 aaKnown RBP7.55□□□□□ -1.2
VCAN-207ENST00000507162 SLC8A1P32418 973 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 UGT1A5P35504 534 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 CD97P48960 835 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 PPP2CBP62714 309 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 PPP2CAP67775 309 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 ZNF542PQ5EBM4 170 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 C10orf120Q5SQS8 335 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 GUSBP11Q6P575 273 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.55□□□□□ -1.2
VCAN-207ENST00000507162 RAB11FIP2Q7L804 512 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 DSG4Q86SJ6 1040 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 HEATR4Q86WZ0 1026 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 MMAAQ8IVH4 418 aaKnown RBP7.55□□□□□ -1.2
VCAN-207ENST00000507162 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 RSPH9Q9H1X1 276 aaPredicted RBP7.55□□□□□ -1.2
VCAN-207ENST00000507162 IKZF4Q9H2S9 585 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 DPEP3Q9H4B8 488 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 USP29Q9HBJ7 922 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 KLHL11Q9NVR0 708 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 NLGN3Q9NZ94 848 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 PISDQ9UG56 409 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 SIX4Q9UIU6 781 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 ITGA11Q9UKX5 1188 aa7.55□□□□□ -1.2
VCAN-207ENST00000507162 ZNF510Q9Y2H8 683 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms