RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TBL1XO60907 577 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 GABBR2O75899 941 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 TRIM16O95361 564 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 PRKCHP24723 683 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 COPAP53621 1224 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 BPIFB4P59827 614 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 YWHAZP63104 245 aaKnown RBP14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 PTK2Q05397 1052 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 SLC12A1Q13621 1099 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 CDH18Q13634 790 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 PLEKHG6Q3KR16 790 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 FAM133BQ5BKY9 247 aaKnown RBP14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 TMEM215Q68D42 235 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 ADIPOR2Q86V24 386 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 SCUBE3Q8IX30 993 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 ATP6V0D2Q8N8Y2 350 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 TTC17Q96AE7 1141 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 BTN2A3PQ96KV6 586 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 FCRL2Q96LA5 508 aaPredicted RBP14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 GTPBP2Q9BX10 602 aaKnown RBP14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 TPX2Q9ULW0 747 aaKnown RBP14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 ASCC3Q8N3C0 2202 aaKnown RBP14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 PIK3R2O00459 728 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 RNASEH1O60930 286 aaKnown RBP14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 DNTTP04053 509 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 ERCC5P28715 1186 aaPredicted RBP14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 MTIF2P46199 727 aaKnown RBP14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 CDK17Q00537 523 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 ARID5BQ14865 1188 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 CACNA1EQ15878 2313 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 MAN2A1Q16706 1144 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 MS4A13Q5J8X5 152 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 EFHC1Q5JVL4 640 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 TTC39BQ5VTQ0 682 aaPredicted RBP14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 CREBRFQ8IUR6 639 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 MINDY1Q8N5J2 469 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 DEFB119Q8N690 84 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 CLEC4CQ8WTT0 213 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 SHC3Q92529 594 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 GPR174Q9BXC1 333 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 SGK2Q9HBY8 427 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 OSGEPQ9NPF4 335 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 KIAA1522Q9P206 1035 aaPredicted RBP14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 PCDHGC3Q9UN70 934 aa14.96□□□□□ -0.01
HMGCS1-203ENST00000507004 CACNA1BQ00975 2339 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 PCNX2A6NKB5 2137 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 PAPSS1O43252 624 aaPredicted RBP14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 HSF2BPO75031 334 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 TRUB2O95900 331 aaKnown RBP14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 FYNP06241 537 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 SRPRAP08240 638 aaKnown RBP14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 NNMTP40261 264 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 USP8P40818 1118 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 SULT2A1Q06520 285 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 PDCLQ13371 301 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 CAMK4Q16566 473 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 ST3GAL2Q16842 350 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 ZNF776Q68DI1 518 aaPredicted RBP14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 DENND1BQ6P3S1 775 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 RFWD3Q6PCD5 774 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 USP30Q70CQ3 517 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 PIP4P1Q86T03 277 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 ZDHHC17Q8IUH5 632 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 DEFB124Q8NES8 71 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 SORCS1Q8WY21 1168 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 BTBD1Q9H0C5 482 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 SLC6A17Q9H1V8 727 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 RRN3Q9NYV6 651 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 NAALADL1Q9UQQ1 740 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 NCKAP1Q9Y2A7 1128 aa14.95□□□□□ -0.02
HMGCS1-203ENST00000507004 TARSL2A2RTX5 802 aaKnown RBP14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 E5RJQ4 531 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 F5H5T6 163 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 BCAT2O15382 392 aaPredicted RBP14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 LUC7L3O95232 432 aaKnown RBP14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 CER1O95813 267 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 IGLV3-25P01717 112 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 ZNF883P0CG24 379 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 ABCB4P21439 1286 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 SLC6A4P31645 630 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 CCR1P32246 355 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 KRT9P35527 623 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 TEAD4Q15561 434 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 PTPRNQ16849 979 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 ARHGAP44Q17R89 818 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 RABGAP1LQ5R372 815 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 ACBD5Q5T8D3 534 aaPredicted RBP14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 DCAF12L1Q5VU92 463 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 RNF219Q5W0B1 726 aaPredicted RBP14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 TAC4Q86UU9 113 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 CYB5D2Q8WUJ1 264 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 PPP1R13BQ96KQ4 1090 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 CRACR2AQ9BSW2 395 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 CLSTN2Q9H4D0 955 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 PRSS16Q9NQE7 514 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 STIM2Q9P246 746 aa14.94□□□□□ -0.02
HMGCS1-203ENST00000507004 GOLGA6L7A0A1B0GV03 622 aa14.93□□□□□ -0.02
HMGCS1-203ENST00000507004 TMEM8BA6NDV4 472 aa14.93□□□□□ -0.02
HMGCS1-203ENST00000507004 KCNJ18B7U540 433 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms