RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 STARD13Q9Y3M8 1113 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 HS3ST4Q9Y661 456 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 BZW2Q9Y6E2 419 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 FANCMQ8IYD8 2048 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 ADAM23O75077 832 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 ATG13O75143 517 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 KLF8O95600 359 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 F9P00740 461 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 FTLP02792 175 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 HNRNPLP14866 589 aaKnown RBP eCLIP18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 SDC4P31431 198 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 RDXP35241 583 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 PTPN9P43378 593 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 IRAK1P51617 712 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 MRPS21P82921 87 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 CDO1Q16878 200 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 EGFLAMQ63HQ2 1017 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 TMEM215Q68D42 235 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 PPP1R2P3Q6NXS1 205 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 SYT13Q7L8C5 426 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 ANKS1BQ7Z6G8 1248 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 C14orf80Q86SX3 495 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 FAM131BQ86XD5 332 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 CCDC26Q8TAB7 109 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 ACDQ96AP0 544 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 LMLNQ96KR4 655 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 MCEEQ96PE7 176 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 TRIM5Q9C035 493 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 WDCPQ9H6R7 721 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 ADAMTS1Q9UHI8 967 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 SLC12A6Q9UHW9 1150 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 MMP17Q9ULZ9 603 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 SNX10Q9Y5X0 201 aa18.88■□□□□ 0.61
PDLIM7-216ENST00000506537 A0A087X0T9 212 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 MUC22E2RYF6 1773 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 F5H5T6 163 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 SGK1O00141 431 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 MFAP3LO75121 409 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 RTN2O75298 545 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 FAM228BP0C875 321 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 GPD1P21695 349 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 OGDHQ02218 1023 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 TBX2Q13207 712 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 MAMLD1Q13495 774 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 DMC1Q14565 340 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 ARTNQ5T4W7 220 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 PLEKHA7Q6IQ23 1121 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 FBXL22Q6P050 247 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 SND1Q7KZF4 910 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 CIR1Q86X95 450 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 ZNF513Q8N8E2 541 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 TXNDC5Q8NBS9 432 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 MYO18AQ92614 2054 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 CENPIQ92674 756 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 IGSF8Q969P0 613 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 HHIPQ96QV1 700 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 ACOX2Q99424 681 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 IRF2BPLQ9H1B7 796 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 ISCUQ9H1K1 167 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 ABCB8Q9NUT2 735 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 NENFQ9UMX5 172 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 R4GN57 208 aa18.87■□□□□ 0.61
PDLIM7-216ENST00000506537 CCP110O43303 1012 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 CD70P32970 193 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 ADKP55263 362 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 HDAC4P56524 1084 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 AUHQ13825 339 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 TMEM92Q6UXU6 159 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 NUDT18Q6ZVK8 323 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 STRADAQ7RTN6 431 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 TMC6Q7Z403 805 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 KIAA0907Q7Z7F0 614 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 MFN1Q8IWA4 741 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 ZNF683Q8IZ20 524 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 OR8K1Q8NGG5 319 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 KCNV2Q8TDN2 545 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 FAM172AQ8WUF8 416 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 ABHD10Q9NUJ1 306 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 GGA2Q9UJY4 613 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 VANGL2Q9ULK5 521 aa18.86■□□□□ 0.61
PDLIM7-216ENST00000506537 TYW5A2RUC4 315 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 LUC7L3O95232 432 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 PABPC1P11940 636 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 EIF4A3P38919 411 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 NBL1P41271 181 aa18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 ZNF75DP51815 510 aa18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 ZNF143P52747 638 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 HSF5Q4G112 596 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 FSCBQ5H9T9 825 aa18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 DRC7Q8IY82 874 aa18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 CARNMT1Q8N4J0 409 aa18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 ZBTB44Q8NCP5 570 aa18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 FIBINQ8TAL6 211 aa18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 SORCS1Q8WY21 1168 aa18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 ZNF653Q96CK0 615 aa18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 TRIM7Q9C029 511 aa18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 SIK2Q9H0K1 926 aa18.85■□□□□ 0.61
PDLIM7-216ENST00000506537 PARVAQ9NVD7 372 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms