RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 STYXL1Q9Y6J8 313 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 MED13Q9UHV7 2174 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 PTPRJQ12913 1337 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 POM121CA8CG34 1229 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 C10orf142B7Z368 130 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 H0YCG3 227 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 K7ENM7 598 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 CDK2AP1O14519 115 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 VILLO15195 856 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 SUV39H1O43463 412 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 SEMA4FO95754 770 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 MT-CO3P00414 261 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 AFPP02771 609 aaKnown RBP7.38□□□□□ -1.23
VCAN-206ENST00000505615 ITGB3P05106 788 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 MPOP05164 745 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 IGHV4-34P06331 123 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 ZDHHC11BP0C7U3 371 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 IRF1P10914 325 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 ITGB6P18564 788 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 PLCG1P19174 1290 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 CR2P20023 1033 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 CD27P26842 260 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 EPHA8P29322 1005 aaPredicted RBP7.38□□□□□ -1.23
VCAN-206ENST00000505615 ABL2P42684 1182 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 ZNF234Q14588 700 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 IL17AQ16552 155 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 LINC00303Q3SY05 128 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 ARSHQ5FYA8 562 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 TTC38Q5R3I4 469 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 HYIQ5T013 277 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 HECTD3Q5T447 861 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 SFMBT2Q5VUG0 894 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 SNX30Q5VWJ9 437 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 KDM7AQ6ZMT4 941 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 ATG14Q6ZNE5 492 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 TPGS1Q6ZTW0 290 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 HTR3DQ70Z44 454 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 NT5DC4Q86YG4 428 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 SYT2Q8N9I0 419 aaPredicted RBP7.38□□□□□ -1.23
VCAN-206ENST00000505615 NSUN7Q8NE18 718 aaKnown RBP7.38□□□□□ -1.23
VCAN-206ENST00000505615 ZSWIM2Q8NEG5 633 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 OVCA2Q8WZ82 227 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 VCPIP1Q96JH7 1222 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 SLITRK1Q96PX8 696 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 DPH1Q9BZG8 443 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 IKZF4Q9H2S9 585 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 PDRG1Q9NUG6 133 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 EHD2Q9NZN4 543 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 ADAMTS1Q9UHI8 967 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 KCNG1Q9UIX4 513 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 CDH9Q9ULB4 789 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 SLC27A6Q9Y2P4 619 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 F8P00451 2351 aa7.38□□□□□ -1.23
VCAN-206ENST00000505615 SETD2Q9BYW2 2564 aaPredicted RBP7.37□□□□□ -1.23
VCAN-206ENST00000505615 SCN8AQ9UQD0 1980 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 HIVEP3Q5T1R4 2406 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 A0A1W2PNU3 283 aaPredicted RBP7.37□□□□□ -1.23
VCAN-206ENST00000505615 A0A1W2PR77 199 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 A6NJY4 79 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 ADARB2-AS1A8MUL3 147 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 NPC1O15118 1278 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 JAK2O60674 1132 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 FSBPO95073 299 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 IL18RAPO95256 599 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 ITGAVP06756 1048 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 ACADMP11310 421 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 MYF5P13349 255 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 WARSP23381 471 aaKnown RBP7.37□□□□□ -1.23
VCAN-206ENST00000505615 ACP1P24666 158 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 YWHAQP27348 245 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 PGFP49763 221 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 TUBP50607 506 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 ZNF131P52739 623 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 MFAP3P55082 362 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 ERVPABLB-1P60509 514 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 GABREP78334 506 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 TFAMQ00059 246 aaKnown RBP7.37□□□□□ -1.23
VCAN-206ENST00000505615 CYP27A1Q02318 531 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 IFRD2Q12894 506 aaPredicted RBP7.37□□□□□ -1.23
VCAN-206ENST00000505615 GEN1Q17RS7 908 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 MDH1BQ5I0G3 518 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 CDCP2Q5VXM1 449 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 TDRD10Q5VZ19 366 aaKnown RBP7.37□□□□□ -1.23
VCAN-206ENST00000505615 ADALQ6DHV7 355 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 ADAT2Q7Z6V5 191 aaKnown RBP7.37□□□□□ -1.23
VCAN-206ENST00000505615 BRSK2Q8IWQ3 736 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 PDZD8Q8NEN9 1154 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 SCAMP5Q8TAC9 235 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 MYCBPAPQ8TBZ2 947 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 SREK1Q8WXA9 508 aaKnown RBP7.37□□□□□ -1.23
VCAN-206ENST00000505615 BHMTQ93088 406 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 FBXO32Q969P5 355 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 SLC6A18Q96N87 628 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 ZNF518BQ9C0D4 1074 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 LHX5Q9H2C1 402 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 EBF2Q9HAK2 575 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 PLK2Q9NYY3 685 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 IL37Q9NZH6 218 aa7.37□□□□□ -1.23
VCAN-206ENST00000505615 LARSQ9P2J5 1176 aaKnown RBP7.37□□□□□ -1.23
VCAN-206ENST00000505615 WDR35Q9P2L0 1181 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms