RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 COMTP21964 271 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 SLC6A11P48066 632 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 MLLT6P55198 1093 aaPredicted RBP13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 ZXDAP98168 799 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 ARL13BQ3SXY8 428 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 SLC44A4Q53GD3 710 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 ARTNQ5T4W7 220 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 FBXL22Q6P050 247 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 CPXM2Q8N436 756 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 KIAA1958Q8N8K9 716 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 DDI1Q8WTU0 396 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 HSPH1Q92598 858 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 OTUB2Q96DC9 234 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 CHFRQ96EP1 664 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 TMA16Q96EY4 203 aaKnown RBP13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 BBS2Q9BXC9 721 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 KCNH6Q9H252 994 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 KLHL11Q9NVR0 708 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 TRMT1Q9NXH9 659 aaKnown RBP13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 FBXL21Q9UKT6 434 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 USP18Q9UMW8 372 aa13.72□□□□□ -0.21
PDLIM7-212ENST00000504380 GRID2IPA4D2P6 1211 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 KRBA1A5PL33 1030 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 F5H5T6 163 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 ADH1CP00326 375 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 RARAP10276 462 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 ALADP13716 330 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 TYRP14679 529 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 GJA4P35212 333 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 PCK1P35558 622 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 CHKAP35790 457 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 HADHBP55084 474 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 SLC25A11Q02978 314 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 GAD2Q05329 585 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 MESP2Q0VG99 397 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 ACAP1Q15027 740 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 ERMARDQ5T6L9 678 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 FYB2Q5VWT5 728 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 TXNDC11Q6PKC3 985 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 ZNF683Q8IZ20 524 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 DNASE1L2Q92874 299 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 NTAN1Q96AB6 310 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 HAPLN3Q96S86 360 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 KCTD15Q96SI1 283 aaPredicted RBP13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 DDX50Q9BQ39 737 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 DHX35Q9H5Z1 703 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 FBRSL1Q9HCM7 1045 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 MPP6Q9NZW5 540 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 AP4E1Q9UPM8 1137 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 ALG6Q9Y672 507 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 PIAS3Q9Y6X2 628 aa13.71□□□□□ -0.21
PDLIM7-212ENST00000504380 SHISA7A6NL88 538 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 USP27XA6NNY8 438 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 E9PAM4 449 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 SPECC1L-ADORA2AF8WAN1 911 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 CREB3O43889 395 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 PALMO75781 387 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 CNTN5O94779 1100 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 CYBBP04839 570 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 HOXD9P28356 352 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 MAN1A1P33908 653 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 OPRD1P41143 372 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 NUMBP49757 651 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 PFKPQ01813 784 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 NR1H3Q13133 447 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 MLF2Q15773 248 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 MPPE1Q53F39 396 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 ALFQ53S48 1182 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 EFHC2Q5JST6 749 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 ASTLQ6HA08 431 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 TPRG1Q6ZUI0 275 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 DAAM2Q86T65 1068 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 REXO1L1PQ8IX06 675 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 UBALD2Q8IYN6 164 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 SIX5Q8N196 739 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 WFDC5Q8TCV5 224 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 RPRD1AQ96P16 312 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 OSBPL2Q9H1P3 480 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 TRPV5Q9NQA5 729 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 OR12D3Q9UGF7 316 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 CAPN6Q9Y6Q1 641 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 MIA3Q5JRA6 1907 aa13.7□□□□□ -0.22
PDLIM7-212ENST00000504380 ANTXRLA6NF34 631 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 HOXC11O43248 304 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 DCXO43602 365 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 SPOPO43791 374 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 LRIG2O94898 1065 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 FTCDO95954 541 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 PENKP01210 267 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 L1CAMP32004 1257 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 CTHP32929 405 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 GALK1P51570 392 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 NHLH1Q02575 133 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 KDSRQ06136 332 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 SCAPQ12770 1279 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 PON2Q15165 354 aa13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 HADHQ16836 314 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 PPP6R3Q5H9R7 873 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 RWDD4Q6NW29 188 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-212ENST00000504380 SFTPA1Q8IWL2 248 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms