RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TBX10O75333 385 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 APOEP02649 317 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 AFPP02771 609 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 FOSL1P15407 271 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 RXRAP19793 462 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CDK16Q00536 496 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 GSTM4Q03013 218 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 C1QBPQ07021 282 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CDC16Q13042 620 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 HIC1Q14526 733 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TRIP13Q15645 432 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CEBPEQ15744 281 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SHROOM1Q2M3G4 852 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 KCTD21Q4G0X4 260 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 NIPAL1Q6NVV3 410 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 POTEHQ6S545 545 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TOM1L2Q6ZVM7 507 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CHSY1Q86X52 802 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PNMA1Q8ND90 353 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TSPEARQ8WU66 669 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 S100ZQ8WXG8 99 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 STARD8Q92502 1023 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TTC9Q92623 222 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CDKL2Q92772 493 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SLC7A6OSQ96CW6 309 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PDLIM5Q96HC4 596 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 AGBL1Q96MI9 1066 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SLC26A6Q9BXS9 759 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MRPS26Q9BYN8 205 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 BAZ2BQ9UIF8 2168 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SMIM35A0A1B0GVV1 85 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 WDR91A4D1P6 747 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SAC3D1A6NKF1 404 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PRPF4O43172 522 aaKnown RBP eCLIP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 NDUFS2O75306 463 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 FAM58BPP0C7Q3 252 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 OCM2P0CE71 109 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 OCMP0CE72 109 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 HSPA8P11142 646 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 GFAPP14136 432 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 AFMP43652 599 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SCNN1BP51168 640 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 STAT2P52630 851 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PLTPP55058 493 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ASIC1P78348 528 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ITGA7Q13683 1181 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SLC29A2Q14542 456 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 UAP1Q16222 522 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 KLHL38Q2WGJ6 581 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 P3H1Q32P28 736 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TRIM61Q5EBN2 209 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CST9Q5W186 159 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PLBD1Q6P4A8 553 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 IGF2-ASQ6U949 168 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 IZUMO2Q6UXV1 221 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 DHDDSQ86SQ9 333 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 USP37Q86T82 979 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 LRRC39Q96DD0 335 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TOE1Q96GM8 510 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MED30Q96HR3 178 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 GPATCH1Q9BRR8 931 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 NCOA5Q9HCD5 579 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ERVK-5Q9HDB9 667 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 FANCFQ9NPI8 374 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SMOXQ9NWM0 555 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 NLRP2Q9NX02 1062 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PCSK1NQ9UHG2 260 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 NAGPAQ9UK23 515 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CNOT11Q9UKZ1 510 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CDH7Q9ULB5 785 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PRPF19Q9UMS4 504 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PSMD13Q9UNM6 376 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MED16Q9Y2X0 877 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 EXPH5Q8NEV8 1989 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 A0A088AWK7 358 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ESYT3A0FGR9 886 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 C1QTNF9BB2RNN3 333 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 F5H6K3 240 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ICMTO60725 284 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TOP3BO95985 862 aaKnown RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 MYCP01106 439 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 ALDH2P05091 517 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 CSB-PGBD3P0DP91 1061 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 CSTF2P33240 577 aaKnown RBP eCLIP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 MXI1P50539 228 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 CDK9P50750 372 aaKnown RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 GNG2P59768 71 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 EVX2Q03828 476 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 RAD51Q06609 339 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 KLRC3Q07444 240 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TBL3Q12788 808 aaKnown RBP2.86□□□□□ -1.95
NEDD4-204ENST00000503468 STX3Q13277 289 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 TRIP10Q15642 601 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 MOGQ16653 247 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 SMU1Q2TAY7 513 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 NDUFAF5Q5TEU4 345 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 CHSY3Q70JA7 882 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 MRGPREQ86SM8 312 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 LILRB2Q8N423 598 aa2.86□□□□□ -1.95
NEDD4-204ENST00000503468 PPTC7Q8NI37 304 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms