RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 LMLNQ96KR4 655 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 IPO9Q96P70 1041 aaKnown RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 ORAI3Q9BRQ5 295 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 TRIM62Q9BVG3 475 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 ULBP1Q9BZM6 244 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 CIPCQ9C0C6 399 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 SLC6A17Q9H1V8 727 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 CCDC86Q9H6F5 360 aaKnown RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 ERVMER34-1Q9H9K5 563 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 LRRC4Q9HBW1 653 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 METTL14Q9HCE5 456 aaKnown RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 PRSS16Q9NQE7 514 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 FSCN3Q9NQT6 498 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 TMEM51Q9NW97 253 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 EIF2B4Q9UI10 523 aaKnown RBP6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 GGA2Q9UJY4 613 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 CLEC4EQ9ULY5 219 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 LHX6Q9UPM6 363 aa6.36□□□□□ -1.39
LSM3P4-201ENST00000502948 NUMA1Q14980 2115 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 A0A1W2PPC4 97 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 TYW5A2RUC4 315 aaKnown RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 YJEFN3A6XGL0 299 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 E7ENQ6 273 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 SEMA4FO95754 770 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 SRPRAP08240 638 aaKnown RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 PABPC1P11940 636 aaKnown RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 PRKCSHP14314 528 aaPredicted RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 POLR2EP19388 210 aaKnown RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 ACSL1P33121 698 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 CCT8P50990 548 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 CCR5P51681 352 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 ADIGQ0VDE8 80 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 OVGP1Q12889 678 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 ILKQ13418 452 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 EIF4EBP2Q13542 120 aaPredicted RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 SLC12A1Q13621 1099 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 PKP1Q13835 747 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 HNRNPA1L2Q32P51 320 aaKnown RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 CBWD6Q4V339 395 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 FAM133BQ5BKY9 247 aaKnown RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 CBWD3Q5JTY5 395 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 CBWD5Q5RIA9 395 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 MBLAC2Q68D91 279 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 ZNF776Q68DI1 518 aaPredicted RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 CHST9Q7L1S5 443 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 TMPRSS12Q86WS5 348 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 SIX6OS1Q8N1H7 587 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 OXR1Q8N573 874 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 PDCD7Q8N8D1 485 aaKnown RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 HJURPQ8NCD3 748 aaPredicted RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 LSM14AQ8ND56 463 aaKnown RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 OR2I1PQ8NGU4 316 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 RHBDD1Q8TEB9 315 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 TATDN2Q93075 761 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 SLC35C1Q96A29 364 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 ELMO3Q96BJ8 720 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 SLC39A13Q96H72 371 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 TIGD1Q96MW7 591 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 CAMK1GQ96NX5 476 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 SERPINB11Q96P15 392 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 TSG101Q99816 390 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 ARID3AQ99856 593 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 KDM4CQ9H3R0 1056 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 C6orf106Q9H6K1 298 aaPredicted RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 TM9SF3Q9HD45 589 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 CNTN6Q9UQ52 1028 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 NCKAP1Q9Y2A7 1128 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 TLR6Q9Y2C9 796 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 ANKRD6Q9Y2G4 727 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 FNDC3AQ9Y2H6 1198 aaKnown RBP6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 ZDHHC9Q9Y397 364 aa6.35□□□□□ -1.39
LSM3P4-201ENST00000502948 LAMA5O15230 3695 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 A0A1B0GTQ1 180 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 TK2O00142 265 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 RIOK3O14730 519 aaKnown RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 SLC7A4O43246 635 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 LATO43561 262 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 ACSL4O60488 711 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 MAGEC1O60732 1142 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 RNASEH1O60930 286 aaKnown RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 RNGTTO60942 597 aaKnown RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 LTFP02788 710 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 IGHV4-34P06331 123 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 PRR29P0C7W0 189 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 C5AR1P21730 350 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 PRCPP42785 496 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 ACADSBP45954 432 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 RXRGP48443 463 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 FMO5P49326 533 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 PLK1P53350 603 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 OXCT1P55809 520 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 MARSP56192 900 aaKnown RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 ST8SIA6P61647 398 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 SULT2A1Q06520 285 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 CETN1Q12798 172 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 KIF19Q2TAC6 998 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 GOLGA7BQ2TAP0 167 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 FNDC3BQ53EP0 1204 aaKnown RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 TTC39BQ5VTQ0 682 aaPredicted RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 KIAA0895LQ68EN5 471 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms