RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 PTBP2Q9UKA9 531 aaKnown RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 A0A1W2PQC6 194 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 RPS17P08708 135 aaKnown RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 ZDHHC11BP0C7U3 371 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CENPPQ6IPU0 288 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 FAM92BQ6ZTR7 304 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 NATD1Q8N6N6 113 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 EXT2Q93063 718 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PHF11Q9UIL8 331 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 HEATR9A2RTY3 570 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 RFPL2O75678 378 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 APOC3P02656 99 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 ERVK-10P10266 1014 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TNNI3P19429 210 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 C1DQ13901 141 aaKnown RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 INTS6LQ5JSJ4 861 aaKnown RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TPD52L3Q96J77 140 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 Q96MT0 163 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PAQR5Q9NXK6 330 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PNMA8BQ9ULN7 279 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 DYRK1BQ9Y463 629 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 YEATS2Q9ULM3 1422 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 STX16-NPEPL1H3BU86 382 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PSMD9O00233 223 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 EIF3DO15371 548 aaKnown RBP eCLIP4.88□□□□□ -1.631e-65■□□□□ 10.3
NEAT1-202ENST00000501122 RAB3BP20337 219 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 M6PRP20645 277 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 DGCR6Q14129 220 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 NAB2Q15742 525 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 SETD9Q8NE22 299 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 AFG1LQ8WV93 481 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PIGSQ96S52 555 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 KCNJ8Q15842 424 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 RFPL4BQ6ZWI9 263 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 SMYD4Q8IYR2 804 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TERB2Q8NHR7 220 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TRNT1Q96Q11 434 aaKnown RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TBCDQ9BTW9 1192 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TAS2R3Q9NYW6 316 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 WWOXQ9NZC7 414 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PSMD3O43242 534 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 GNAO1P09471 354 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PAMP19021 973 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CDKN2CP42773 168 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 BTDP43251 543 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 SLC30A10Q6XR72 485 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CMTR2Q8IYT2 770 aaKnown RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 FAM50BQ9Y247 325 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 A0A1B0GTH6 734 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CLPXO76031 633 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 POLR2CP19387 275 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 ZSWIM2Q8NEG5 633 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 NXNL1Q96CM4 212 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 KCNK13Q9HB14 408 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 SDHAF2Q9NX18 166 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 SCGNO76038 276 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 AP2A1O95782 977 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CSTF2P33240 577 aaKnown RBP eCLIP4.88□□□□□ -1.636e-21■■■□□ 14.9
NEAT1-202ENST00000501122 NME3Q13232 169 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PDPK2PQ6A1A2 396 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 ATP6V1C2Q8NEY4 427 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CCDC120Q96HB5 630 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CCDC74BQ96LY2 380 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 RMDN3Q96TC7 470 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 IL1RL2Q9HB29 575 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 RAB3DO95716 219 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 EFCAB2Q5VUJ9 269 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 FAM109AQ8N4B1 249 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 ARMCX1Q9P291 453 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 UBQLN2Q9UHD9 624 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 ANGEL1Q9UNK9 670 aaKnown RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 A0A0X1KG70 313 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 M0R036 132 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CSF1RP07333 972 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CD40LGP29965 261 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TIE1P35590 1138 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 AKR1C8PQ5T2L2 129 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 SENP6Q9GZR1 1112 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 DGKBQ9Y6T7 804 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 J3QRK9 145 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PPIL2Q13356 520 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 NDUFAF6Q330K2 333 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 C8orf59Q8N0T1 100 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 MAGEE2Q8TD90 523 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 FBXL8Q96CD0 374 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 SUCLG2Q96I99 432 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TMLHEQ9NVH6 421 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 ABCC11Q96J66 1382 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 MLLT1Q03111 559 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 LILRB1Q8NHL6 650 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TRIM9Q9C026 710 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 COQ3Q9NZJ6 369 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PCDHGB4Q9UN71 923 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 PDE2AO00408 941 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-202ENST00000501122 RBP3P10745 1247 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 MATN1P21941 496 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 ITGA3P26006 1051 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CDK18Q07002 472 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 TRIM32Q13049 653 aa4.88□□□□□ -1.63
NEAT1-202ENST00000501122 CA9Q16790 459 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms