RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 CIPCQ9C0C6 399 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 ACP6Q9NPH0 428 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 COX16Q9P0S2 106 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 CNTN6Q9UQ52 1028 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 FHOD1Q9Y613 1164 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 RIF1Q5UIP0 2472 aaKnown RBP11.1□□□□□ -0.63
CDK11A-222ENST00000498810 PLXND1Q9Y4D7 1925 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 PTPRZ1P23471 2315 aaPredicted RBP11.09□□□□□ -0.63
CDK11A-222ENST00000498810 SGK1O00141 431 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 RHOBTB1O94844 696 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 LATS1O95835 1130 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 RETP07949 1114 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
CDK11A-222ENST00000498810 NTSR1P30989 418 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 GPD2P43304 727 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 SPEM2Q0P670 501 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 BYSLQ13895 437 aaKnown RBP11.09□□□□□ -0.63
CDK11A-222ENST00000498810 DRAP1Q14919 205 aaPredicted RBP11.09□□□□□ -0.63
CDK11A-222ENST00000498810 SYCP1Q15431 976 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 MIIPQ5JXC2 388 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 EMC10Q5UCC4 262 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 TAF3Q5VWG9 929 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 EGFLAMQ63HQ2 1017 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 OR6B2Q6IFH4 312 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 MSANTD2Q6P1R3 559 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 C11orf57Q6ZUT1 292 aaPredicted RBP11.09□□□□□ -0.63
CDK11A-222ENST00000498810 BHLHA9Q7RTU4 235 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 C11orf74Q86VG3 221 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 CPXM2Q8N436 756 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 C12orf50Q8NA57 414 aaPredicted RBP11.09□□□□□ -0.63
CDK11A-222ENST00000498810 C1orf131Q8NDD1 294 aaKnown RBP11.09□□□□□ -0.63
CDK11A-222ENST00000498810 ERLEC1Q96DZ1 483 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 PPP1R13BQ96KQ4 1090 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 SPAG5Q96R06 1193 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 POPDC2Q9HBU9 364 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 TJP2Q9UDY2 1190 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 INVSQ9Y283 1065 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 USP34Q70CQ2 3546 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 MYO15AQ9UKN7 3530 aa11.09□□□□□ -0.63
CDK11A-222ENST00000498810 NYNRINQ9P2P1 1898 aaKnown RBP11.08□□□□□ -0.64
CDK11A-222ENST00000498810 BECN2A8MW95 431 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 TRIM24O15164 1050 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 SYNCRIPO60506 623 aaKnown RBP11.08□□□□□ -0.64
CDK11A-222ENST00000498810 GREM1O60565 184 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 KLKB1P03952 638 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 HOXC13P31276 330 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 ID4P47928 161 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 LMNB2Q03252 620 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 TYRO3Q06418 890 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 VAC14Q08AM6 782 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 MESP2Q0VG99 397 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 KRT31Q15323 416 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 AASDHQ4L235 1098 aaPredicted RBP11.08□□□□□ -0.64
CDK11A-222ENST00000498810 ADGRF1Q5T601 910 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 KLHDC7AQ5VTJ3 777 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 FYB2Q5VWT5 728 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 CAVIN1Q6NZI2 390 aaKnown RBP11.08□□□□□ -0.64
CDK11A-222ENST00000498810 RBM43Q6ZSC3 357 aaKnown RBP11.08□□□□□ -0.64
CDK11A-222ENST00000498810 KBTBD6Q86V97 674 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 SLC47A2Q86VL8 602 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 CHSY1Q86X52 802 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 AOPEPQ8N6M6 819 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 ZNF557Q8N988 423 aaPredicted RBP11.08□□□□□ -0.64
CDK11A-222ENST00000498810 HJURPQ8NCD3 748 aaPredicted RBP11.08□□□□□ -0.64
CDK11A-222ENST00000498810 TMEM35BQ8NCS4 154 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 MDGA1Q8NFP4 955 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 DQX1Q8TE96 717 aaKnown RBP11.08□□□□□ -0.64
CDK11A-222ENST00000498810 STK32AQ8WU08 396 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 TMA16Q96EY4 203 aaKnown RBP11.08□□□□□ -0.64
CDK11A-222ENST00000498810 SIX2Q9NPC8 291 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 PLCB1Q9NQ66 1216 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 FAM207AQ9NSI2 230 aaPredicted RBP11.08□□□□□ -0.64
CDK11A-222ENST00000498810 FANCLQ9NW38 375 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 STIM2Q9P246 746 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 EBF1Q9UH73 591 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 SLC12A6Q9UHW9 1150 aa11.08□□□□□ -0.64
CDK11A-222ENST00000498810 AJAP1Q9UKB5 411 aaPredicted RBP11.08□□□□□ -0.64
CDK11A-222ENST00000498810 OTOGLQ3ZCN5 2332 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 FAM170AA1A519 330 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 IRAK2O43187 625 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 PAPSS1O43252 624 aaPredicted RBP11.07□□□□□ -0.64
CDK11A-222ENST00000498810 ACSL4O60488 711 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 TBL1XO60907 577 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 HSF2BPO75031 334 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 PENKP01210 267 aaPredicted RBP11.07□□□□□ -0.64
CDK11A-222ENST00000498810 UCHL3P15374 230 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 ABCB4P21439 1286 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 KIR2DL1P43626 348 aaPredicted RBP11.07□□□□□ -0.64
CDK11A-222ENST00000498810 DHPSP49366 369 aaPredicted RBP11.07□□□□□ -0.64
CDK11A-222ENST00000498810 POLR2FP61218 127 aaKnown RBP11.07□□□□□ -0.64
CDK11A-222ENST00000498810 YWHAZP63104 245 aaKnown RBP11.07□□□□□ -0.64
CDK11A-222ENST00000498810 TPM4P67936 248 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 CDK17Q00537 523 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 CREB5Q02930 508 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 POU4F2Q12837 409 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 CDH18Q13634 790 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 EIF4HQ15056 248 aaKnown RBP11.07□□□□□ -0.64
CDK11A-222ENST00000498810 FNDC3BQ53EP0 1204 aaKnown RBP11.07□□□□□ -0.64
CDK11A-222ENST00000498810 DCAF6Q58WW2 860 aa11.07□□□□□ -0.64
CDK11A-222ENST00000498810 EFHC1Q5JVL4 640 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms