RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 CFAP157Q5JU67 520 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 GLRA4Q5JXX5 417 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 MARCH8Q5T0T0 291 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 UNC5AQ6ZN44 842 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 DPP9Q86TI2 863 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 RASSF3Q86WH2 238 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 PDSS2Q86YH6 399 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 ARHGAP18Q8N392 663 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 CCDC33Q8N5R6 958 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 POU5F2Q8N7G0 328 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 OR6Y1Q8NGX8 325 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 APOL6Q9BWW8 343 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 TUBGCP4Q9UGJ1 667 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 HES2Q9Y543 173 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 TRDMT1O14717 391 aaKnown RBP16.87■□□□□ 0.29
COL6A1-206ENST00000498614 PAPSS1O43252 624 aaPredicted RBP16.87■□□□□ 0.29
COL6A1-206ENST00000498614 LYPLA1O75608 230 aaPredicted RBP16.87■□□□□ 0.29
COL6A1-206ENST00000498614 GABBR2O75899 941 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 APOEP02649 317 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 APRTP07741 180 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 CTGFP29279 349 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 CRHR1P34998 444 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 GRM5P41594 1212 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 ATXN1P54253 815 aaKnown RBP16.87■□□□□ 0.29
COL6A1-206ENST00000498614 DYNC1I2Q13409 638 aaKnown RBP16.87■□□□□ 0.29
COL6A1-206ENST00000498614 LAMB3Q13751 1172 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 HIC1Q14526 733 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 PKDCCQ504Y2 493 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 BOLA3Q53S33 107 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 EFHC1Q5JVL4 640 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 LPCAT4Q643R3 524 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 DHDDSQ86SQ9 333 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 ADGRF2Q8IZF7 708 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 STKLD1Q8NE28 680 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 CLEC4CQ8WTT0 213 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 NCSTNQ92542 709 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 EPAS1Q99814 870 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 MAGEB5Q9BZ81 275 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 ARHGAP39Q9C0H5 1083 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 XAB2Q9HCS7 855 aaKnown RBP16.87■□□□□ 0.29
COL6A1-206ENST00000498614 COL1A2P08123 1366 aa16.87■□□□□ 0.29
COL6A1-206ENST00000498614 SLC15A5A6NIM6 579 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 DPYSL4O14531 572 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 ITM2AO43736 263 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 KRT38O76015 456 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 ETS2P15036 469 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 VEGFBP49765 207 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 CBLBQ13191 982 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 MSLNQ13421 630 aaPredicted RBP16.86■□□□□ 0.29
COL6A1-206ENST00000498614 STILQ15468 1287 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 AAGABQ6PD74 315 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 ACAD11Q709F0 780 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 ADGRG6Q86SQ4 1221 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 TTC39CQ8N584 583 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 C7orf31Q8N865 590 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 RAB3IL1Q8TBN0 382 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 C18orf25Q96B23 403 aaPredicted RBP16.86■□□□□ 0.29
COL6A1-206ENST00000498614 CCDC28BQ9BUN5 200 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 DPEP3Q9H4B8 488 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.86■□□□□ 0.29
COL6A1-206ENST00000498614 TBC1D30Q9Y2I9 924 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 BIRC5O15392 142 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 PDE5AO76074 875 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 TGM2P21980 687 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 HDAC4P56524 1084 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 CCNIQ14094 377 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 C16orf46Q6P387 395 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 PLEKHH3Q7Z736 793 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 NT5DC4Q86YG4 428 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 MPP5Q8N3R9 675 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 OR6B3Q8NGW1 331 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 SLC35F5Q8WV83 523 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 CENPKQ9BS16 269 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 SLC4A5Q9BY07 1137 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 EIF2AQ9BY44 585 aaKnown RBP16.86■□□□□ 0.29
COL6A1-206ENST00000498614 FAM49AQ9H0Q0 323 aaPredicted RBP16.86■□□□□ 0.29
COL6A1-206ENST00000498614 VTA1Q9NP79 307 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 ETNK2Q9NVF9 386 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 THAP1Q9NVV9 213 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 HESX1Q9UBX0 185 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 ADAMTS6Q9UKP5 1117 aa16.86■□□□□ 0.29
COL6A1-206ENST00000498614 CA12O43570 354 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 TRPA1O75762 1119 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 GSRP00390 522 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 GRIA2P42262 883 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 RABGAP1LQ5R372 815 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 SLC9A4Q6AI14 798 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 DENND5BQ6ZUT9 1274 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 MARK2Q7KZI7 788 aaKnown RBP16.85■□□□□ 0.29
COL6A1-206ENST00000498614 TMEM110Q86TL2 294 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 ST13P4Q8IZP2 240 aaPredicted RBP16.85■□□□□ 0.29
COL6A1-206ENST00000498614 NPLOC4Q8TAT6 608 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 USP6NLQ92738 828 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 ZDHHC7Q9NXF8 308 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 DNAJC16Q9Y2G8 782 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 MAD1L1Q9Y6D9 718 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 PLXNB2O15031 1838 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 ATP5BP06576 529 aaKnown RBP16.85■□□□□ 0.29
COL6A1-206ENST00000498614 EPHB1P54762 984 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 CAP1Q01518 475 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms