RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 FAM26FQ5R3K3 315 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 KIAA0907Q7Z7F0 614 aaPredicted RBP13.2□□□□□ -0.3
TRIM27-207ENST00000498117 NELFCDQ8IXH7 590 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 SNRNP27Q8WVK2 155 aaKnown RBP13.2□□□□□ -0.3
TRIM27-207ENST00000498117 KCNE4Q8WWG9 221 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 TTC9Q92623 222 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 SERAC1Q96JX3 654 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 NT5C1AQ9BXI3 368 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 DUSP16Q9BY84 665 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 DPH1Q9BZG8 443 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 DNAI2Q9GZS0 605 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 NEUROG2Q9H2A3 272 aa13.2□□□□□ -0.3
TRIM27-207ENST00000498117 A0A087X0B3 334 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 A0A1W2PP55 124 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 LRRIQ3A6PVS8 624 aaPredicted RBP13.19□□□□□ -0.3
TRIM27-207ENST00000498117 KLK10O43240 276 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 DXOO77932 396 aaKnown RBP13.19□□□□□ -0.3
TRIM27-207ENST00000498117 CSRP3P50461 194 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 ERVPABLB-1P60509 514 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 ST8SIA6P61647 398 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 ASIC1P78348 528 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 KCNJ12Q14500 433 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 TRIP4Q15650 581 aaPredicted RBP13.19□□□□□ -0.3
TRIM27-207ENST00000498117 PROX2Q3B8N5 592 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 LURAP1LQ8IV03 231 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 PDILTQ8N807 584 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 PLEKHO2Q8TD55 490 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 OMDQ99983 421 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 TFIP11Q9UBB9 837 aaKnown RBP13.19□□□□□ -0.3
TRIM27-207ENST00000498117 FZD4Q9ULV1 537 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
TRIM27-207ENST00000498117 PCDHB1Q9Y5F3 818 aa13.19□□□□□ -0.3
TRIM27-207ENST00000498117 WNT9AO14904 365 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 MID1O15344 667 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 MAGEC1O60732 1142 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 RNASEH2AO75792 299 aaKnown RBP13.18□□□□□ -0.3
TRIM27-207ENST00000498117 MPOP05164 745 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 SLFN14P0C7P3 912 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 ASPAP45381 313 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 LSSP48449 732 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 GABREP78334 506 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 INCA1Q0VD86 236 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 CST6Q15828 149 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 ZACNQ401N2 412 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 KANSL1Q7Z3B3 1105 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 ZC3H3Q8IXZ2 948 aaKnown RBP13.18□□□□□ -0.3
TRIM27-207ENST00000498117 MFSD2AQ8NA29 543 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 TWNKQ96RR1 684 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 KBTBD4Q9NVX7 518 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 SERGEFQ9UGK8 458 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 PIEZO2Q9H5I5 2752 aa13.18□□□□□ -0.3
TRIM27-207ENST00000498117 PLXNA2O75051 1894 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 C10orf142B7Z368 130 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 SIN3BO75182 1162 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 ASS1P00966 412 aaKnown RBP13.17□□□□□ -0.3
TRIM27-207ENST00000498117 SLC8A1P32418 973 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 YWHAGP61981 247 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM27-207ENST00000498117 DAB2P98082 770 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
TRIM27-207ENST00000498117 SRSF1Q07955 248 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM27-207ENST00000498117 OVGP1Q12889 678 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 ZNF211Q13398 564 aaPredicted RBP13.17□□□□□ -0.3
TRIM27-207ENST00000498117 RABEP1Q15276 862 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 KNOP1Q1ED39 458 aaKnown RBP13.17□□□□□ -0.3
TRIM27-207ENST00000498117 HNRNPA1L2Q32P51 320 aaKnown RBP13.17□□□□□ -0.3
TRIM27-207ENST00000498117 HS1BP3Q53T59 392 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 ADGRF1Q5T601 910 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 SPOPLQ6IQ16 392 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 SND1Q7KZF4 910 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM27-207ENST00000498117 ZNF557Q8N988 423 aaPredicted RBP13.17□□□□□ -0.3
TRIM27-207ENST00000498117 OR14C36Q8NHC7 312 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 GOLGA5Q8TBA6 731 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 UBXN6Q9BZV1 441 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 CUEDC2Q9H467 287 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 MTG2Q9H4K7 406 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 POLR1BQ9H9Y6 1135 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 CYP3A43Q9HB55 503 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 THSD1Q9NS62 852 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 OLA1Q9NTK5 396 aaKnown RBP13.17□□□□□ -0.3
TRIM27-207ENST00000498117 IL17BQ9UHF5 180 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 STOML2Q9UJZ1 356 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 HBS1LQ9Y450 684 aaKnown RBP13.17□□□□□ -0.3
TRIM27-207ENST00000498117 PTPN13Q12923 2485 aa13.17□□□□□ -0.3
TRIM27-207ENST00000498117 TARSL2A2RTX5 802 aaKnown RBP13.16□□□□□ -0.3
TRIM27-207ENST00000498117 SIGLEC6O43699 453 aa13.16□□□□□ -0.3
TRIM27-207ENST00000498117 USP12O75317 370 aa13.16□□□□□ -0.3
TRIM27-207ENST00000498117 LATS1O95835 1130 aa13.16□□□□□ -0.3
TRIM27-207ENST00000498117 GOT1P17174 413 aa13.16□□□□□ -0.3
TRIM27-207ENST00000498117 ARID5BQ14865 1188 aa13.16□□□□□ -0.3
TRIM27-207ENST00000498117 MPP7Q5T2T1 576 aa13.16□□□□□ -0.3
TRIM27-207ENST00000498117 PPP1R26Q5T8A7 1209 aaPredicted RBP13.16□□□□□ -0.3
TRIM27-207ENST00000498117 NAPEPLDQ6IQ20 393 aa13.16□□□□□ -0.3
TRIM27-207ENST00000498117 CNNM4Q6P4Q7 775 aa13.16□□□□□ -0.3
TRIM27-207ENST00000498117 SV2AQ7L0J3 742 aa13.16□□□□□ -0.3
TRIM27-207ENST00000498117 PRICKLE2Q7Z3G6 844 aa13.16□□□□□ -0.3
TRIM27-207ENST00000498117 PRPF39Q86UA1 669 aaKnown RBP13.16□□□□□ -0.3
TRIM27-207ENST00000498117 IQCHQ86VS3 1027 aa13.16□□□□□ -0.3
TRIM27-207ENST00000498117 SPATS2Q86XZ4 545 aaKnown RBP13.16□□□□□ -0.3
TRIM27-207ENST00000498117 MMAAQ8IVH4 418 aaKnown RBP13.16□□□□□ -0.3
TRIM27-207ENST00000498117 TTC17Q96AE7 1141 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms