RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 DISP1Q96F81 1524 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 PLB1Q6P1J6 1458 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 VPS8Q8N3P4 1428 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 ERICH3Q5RHP9 1530 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 INO80B-WBP1J3KQ70 363 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 TNFRSF6BO95407 300 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 LARGE1O95461 756 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 SGPL1O95470 568 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 ITGA2BP08514 1039 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 RPS6KB1P23443 525 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 SERPINF1P36955 418 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 SLC12A2P55011 1212 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 ID2Q02363 134 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 ZNF91Q05481 1191 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 GALNT1Q10472 559 aaPredicted RBP3.26□□□□□ -1.89
RIF1-212ENST00000498041 MTA1Q13330 715 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 BIRC2Q13490 618 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 KLF9Q13886 244 aaPredicted RBP3.26□□□□□ -1.89
RIF1-212ENST00000498041 SLC9C1Q4G0N8 1177 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 Q4G0T1 1027 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 EARS2Q5JPH6 523 aaKnown RBP3.26□□□□□ -1.89
RIF1-212ENST00000498041 ATPAF1Q5TC12 328 aaPredicted RBP3.26□□□□□ -1.89
RIF1-212ENST00000498041 PXDC1Q5TGL8 231 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 ANKRD40Q6AI12 368 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 DEF8Q6ZN54 512 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 RBM44Q6ZP01 1051 aaKnown RBP3.26□□□□□ -1.89
RIF1-212ENST00000498041 C1QL2Q7Z5L3 287 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 RFX6Q8HWS3 928 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 ATG16L2Q8NAA4 619 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 VPS37AQ8NEZ2 397 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 PIGOQ8TEQ8 1089 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 POF1BQ8WVV4 589 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 SMG7Q92540 1137 aaKnown RBP3.26□□□□□ -1.89
RIF1-212ENST00000498041 MCRS1Q96EZ8 462 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 ZNF778Q96MU6 729 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 RMDN3Q96TC7 470 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 KATNAL1Q9BW62 490 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 GATA5Q9BWX5 397 aaPredicted RBP3.26□□□□□ -1.89
RIF1-212ENST00000498041 VPS16Q9H269 839 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 CCDC134Q9H6E4 229 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 PRDM16Q9HAZ2 1276 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 ERVK-5Q9HDB9 667 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 HERC5Q9UII4 1024 aaKnown RBP3.26□□□□□ -1.89
RIF1-212ENST00000498041 B3GNT3Q9Y2A9 372 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 ZBTB1Q9Y2K1 713 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 GRIN2BQ13224 1484 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 IFT140Q96RY7 1462 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 EEA1Q15075 1411 aa3.26□□□□□ -1.89
RIF1-212ENST00000498041 PRG4Q92954 1404 aaPredicted RBP3.26□□□□□ -1.89
RIF1-212ENST00000498041 EMSYQ7Z589 1322 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 GRIN2AQ12879 1464 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 C3orf70A6NLC5 250 aaPredicted RBP3.25□□□□□ -1.89
RIF1-212ENST00000498041 C2CD4BA6NLJ0 364 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 EFCAB8A8MWE9 144 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 KIF28PB7ZC32 967 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 M0QYT0 321 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 TOP3BO95985 862 aaKnown RBP3.25□□□□□ -1.89
RIF1-212ENST00000498041 CSTBP04080 98 aaKnown RBP3.25□□□□□ -1.89
RIF1-212ENST00000498041 CTSAP10619 480 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 AKR1A1P14550 325 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 ST6GAL1P15907 406 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 ITGB6P18564 788 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 TFEBP19484 476 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 HOXA7P31268 230 aaPredicted RBP3.25□□□□□ -1.89
RIF1-212ENST00000498041 GRK5P34947 590 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 CPA2P48052 419 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 SOX2P48431 317 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 RPL15P61313 204 aaKnown RBP3.25□□□□□ -1.89
RIF1-212ENST00000498041 RBM6P78332 1123 aaKnown RBP3.25□□□□□ -1.89
RIF1-212ENST00000498041 TLE3Q04726 772 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 DMWDQ09019 674 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 SF3A3Q12874 501 aaKnown RBP eCLIP3.25□□□□□ -1.89
RIF1-212ENST00000498041 BLMHQ13867 455 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 KRT72Q14CN4 511 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 ETFDHQ16134 617 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 ANXA2RQ3ZCQ2 193 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 TRIM60Q495X7 471 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 ZNF425Q6IV72 752 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 C11orf87Q6NUJ2 197 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 TMEM88Q6PEY1 159 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 KLHL17Q6TDP4 642 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 DHRS13Q6UX07 377 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 SLC39A5Q6ZMH5 540 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 CCDC117Q8IWD4 279 aaPredicted RBP3.25□□□□□ -1.89
RIF1-212ENST00000498041 ENAHQ8N8S7 591 aaPredicted RBP3.25□□□□□ -1.89
RIF1-212ENST00000498041 ADPRHL1Q8NDY3 354 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 KAT2BQ92831 832 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 COQ8BQ96D53 544 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 TRMT61AQ96FX7 289 aaKnown RBP3.25□□□□□ -1.89
RIF1-212ENST00000498041 GPR78Q96P69 363 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 RPS6KC1Q96S38 1066 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 TMEM79Q9BSE2 394 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 RTKNQ9BST9 563 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 MLXIPLQ9NP71 852 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 RRP7BPQ9NSQ0 103 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 TRNAU1APQ9NX07 287 aaKnown RBP3.25□□□□□ -1.89
RIF1-212ENST00000498041 DACT1Q9NYF0 836 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 LRFN1Q9P244 771 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 SLC12A4Q9UP95 1085 aa3.25□□□□□ -1.89
RIF1-212ENST00000498041 CNTN6Q9UQ52 1028 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms