RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 USP3Q9Y6I4 520 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 WDR91A4D1P6 747 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 MEIS3P2A8K0S8 358 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 APOL1O14791 398 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 MGEA5O60502 916 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 PEX11AO75192 247 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 L1CAMP32004 1257 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 RPL22P35268 128 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 THPOP40225 353 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 NR2C2P49116 596 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 CD300LGQ6UXG3 332 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 RNF180Q86T96 592 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 CPT1BQ92523 772 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 LRRC37BQ96QE4 947 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 RBM15Q96T37 977 aaKnown RBP eCLIP11.93□□□□□ -0.54e-6■■■□□ 15.3
SNRNP200-208ENST00000497539 SLC9A7Q96T83 725 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 NPY6RQ99463 290 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 SYT15Q9BQS2 421 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 SLC39A3Q9BRY0 314 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 TBC1D10AQ9BXI6 508 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 CALN1Q9BXU9 219 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 MTMR10Q9NXD2 777 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 FAM47DPA6NHR8 397 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 CDH16O75309 829 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 ZSCAN5DPP0CG00 497 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 T-ENOLP0DO92 83 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 GNAZP19086 355 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 NOS2P35228 1153 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 CLCNKBP51801 687 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 GDF10P55107 478 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 IL9RQ01113 521 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 ITGA7Q13683 1181 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 FASTKD3Q14CZ7 662 aaKnown RBP11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 PKN2Q16513 984 aaKnown RBP11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 ANO7Q6IWH7 933 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 CENPUQ71F23 418 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 SLC7A5P1Q8MH63 180 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 PCDH19Q8TAB3 1148 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 RSAD2Q8WXG1 361 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 IRGQQ8WZA9 623 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 PGAP3Q96FM1 320 aaPredicted RBP11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 C12orf65Q9H3J6 166 aaKnown RBP11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 USP29Q9HBJ7 922 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 DDX43Q9NXZ2 648 aaKnown RBP11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 ARHGEF37A1IGU5 675 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 TMEM247A6NEH6 219 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 BOLA2-SMG1P6H3BVE0 249 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 PIK3R2O00459 728 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 GRAP2O75791 330 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 CTSHP09668 335 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 RBP3P10745 1247 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 ODC1P11926 461 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 ETS1P14921 441 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 CALB2P22676 271 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 PCSK1P29120 753 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 CD52P31358 61 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 RPA3P35244 121 aaPredicted RBP11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 ACLYP53396 1101 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 MMRN1Q13201 1228 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 MTM1Q13496 603 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 FAM171BQ6P995 826 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 BEND5Q7L4P6 421 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 FAM35AQ86V20 835 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 C3orf58Q8NDZ4 430 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 CLEC4CQ8WTT0 213 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 HAUS1Q96CS2 278 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 RAB3IPQ96QF0 476 aaPredicted RBP11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 RNPEPL1Q9HAU8 725 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 PNPLA8Q9NP80 782 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 NGRNQ9NPE2 291 aaKnown RBP11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 CNGB3Q9NQW8 809 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 TXLNGQ9NUQ3 528 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 RNF19AQ9NV58 838 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 RRN3Q9NYV6 651 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 FZD10Q9ULW2 581 aa11.92□□□□□ -0.5
SNRNP200-208ENST00000497539 HHLA1C9JL84 531 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 CHADO15335 359 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 MSL3P1P0C860 447 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 TPBGLP0DKB5 382 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 KRT15P19012 456 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 TYMPP19971 482 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 SCNN1GP51170 649 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 APLP1P51693 650 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 ARPC4P59998 168 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 DYNLT1P63172 113 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 SCAPQ12770 1279 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 TUSC3Q13454 348 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 CDKL3Q8IVW4 592 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 UNC45BQ8IWX7 931 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 MAML1Q92585 1016 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 NTAN1Q96AB6 310 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 SLC7A6OSQ96CW6 309 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 RTP3Q9BQQ7 232 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 ACBD6Q9BR61 282 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 CCDC77Q9BR77 488 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 SAYSD1Q9NPB0 183 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 RGS18Q9NS28 235 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 NUMBLQ9Y6R0 609 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 EXOC1LA0A1B0GW35 172 aa11.91□□□□□ -0.5
SNRNP200-208ENST00000497539 A0A1W2PPM1 405 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms