RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 USH1CQ9Y6N9 552 aa12.68□□□□□ -0.38
PDE6B-212ENST00000496514 SHROOM3Q8TF72 1996 aa12.68□□□□□ -0.38
PDE6B-212ENST00000496514 KIF3CO14782 793 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 T-ENOLP0DO92 83 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 ELNP15502 786 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 RPL10AP62906 217 aaKnown RBP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 CAP1Q01518 475 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 EFHC1Q5JVL4 640 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 AGMOQ6ZNB7 445 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 ARHGAP36Q6ZRI8 547 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 ARID3BQ8IVW6 561 aaPredicted RBP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 QKIQ96PU8 341 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 EBNA1BP2Q99848 306 aaKnown RBP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 DERAQ9Y315 318 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 USP3Q9Y6I4 520 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 M0QZ92 97 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 THP07101 528 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 MYL2P10916 166 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 TTC39BQ5VTQ0 682 aaPredicted RBP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 DNAAF3Q8N9W5 541 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 CENPIQ92674 756 aaPredicted RBP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 PPP1R10Q96QC0 940 aaKnown RBP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 TMEM120AQ9BXJ8 343 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 SHCBP1LQ9BZQ2 653 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 CAB39LQ9H9S4 337 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 GDAP2Q9NXN4 497 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 EME2A4GXA9 379 aaPredicted RBP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 HAS3O00219 553 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 MGRN1O60291 552 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 RFPL1O75677 317 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 SNRPAP09012 282 aaKnown RBP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 KCNE1P15382 129 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 MRPS6P82932 125 aaKnown RBP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 BST1Q10588 318 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 DLG2Q15700 870 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 FYB2Q5VWT5 728 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 RNF43Q68DV7 783 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 TTC39CQ8N584 583 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 HNRNPABQ99729 332 aaKnown RBP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 ATXN3LQ9H3M9 355 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 TRMT13Q9NUP7 481 aaKnown RBP12.67□□□□□ -0.38
PDE6B-212ENST00000496514 ARL8BQ9NVJ2 186 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 SFMBT1Q9UHJ3 866 aa12.67□□□□□ -0.38
PDE6B-212ENST00000496514 ZSWIM8A7E2V4 1837 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 A0A0A0MRY4 1105 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 XPOTO43592 962 aaKnown RBP12.66□□□□□ -0.38
PDE6B-212ENST00000496514 UNC5CO95185 931 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 NEK3P51956 506 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 TPI1P60174 286 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 WASHC5Q12768 1159 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 RCN2Q14257 317 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 RASAL3Q86YV0 1011 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 TRIB2Q92519 343 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 OXNAD1Q96HP4 312 aaPredicted RBP12.66□□□□□ -0.38
PDE6B-212ENST00000496514 SPATA13Q96N96 652 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 AGAP2Q99490 1192 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 TKTL2Q9H0I9 626 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 KRT37O76014 449 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 ETV4P43268 484 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 CCNHP51946 323 aaPredicted RBP12.66□□□□□ -0.38
PDE6B-212ENST00000496514 ARFIP2P53365 341 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 CERCAMQ5T4B2 595 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 LRRTM3Q86VH5 581 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 LONP2Q86WA8 852 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 GSDMBQ8TAX9 411 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 HSFY1Q96LI6 401 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 PPP1R36Q96LQ0 422 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 NPY6RQ99463 290 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 ETAA1Q9NY74 926 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 SLC45A1Q9Y2W3 748 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 TPP1O14773 563 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 ZBTB24O43167 697 aaPredicted RBP12.66□□□□□ -0.38
PDE6B-212ENST00000496514 GSTA1P08263 222 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 TROVE2P10155 538 aaKnown RBP eCLIP12.66□□□□□ -0.38
PDE6B-212ENST00000496514 NOS2P35228 1153 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 RFWD3Q6PCD5 774 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 SH2D5Q6ZV89 423 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 TTC8Q8TAM2 541 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 MFSD3Q96ES6 412 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 B3GALT6Q96L58 329 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 ZNF778Q96MU6 729 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 VPS11Q9H270 941 aa12.66□□□□□ -0.38
PDE6B-212ENST00000496514 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.65□□□□□ -0.38
PDE6B-212ENST00000496514 DFFAO00273 331 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 CHUKO15111 745 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 GCATO75600 419 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 ALDH3A1P30838 453 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 GCKP35557 465 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 RGS2P41220 211 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 PNPLA4P41247 253 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 ACADSBP45954 432 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 SNX16P57768 344 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 SESN3P58005 492 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 ZBTB17Q13105 803 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 OTOP3Q7RTS5 596 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 ZDHHC17Q8IUH5 632 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 TNS4Q8IZW8 715 aa12.65□□□□□ -0.38
PDE6B-212ENST00000496514 ACVR1CQ8NER5 493 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms