RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 PALMO75781 387 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 DRD1P21728 446 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 HSPA9P38646 679 aaKnown RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 GSCP56915 257 aaPredicted RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 GRM2Q14416 872 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 PPP1R7Q15435 360 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 SNX30Q5VWJ9 437 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 DARS2Q6PI48 645 aaKnown RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 SERPINA13PQ6UXR4 307 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 PAQR9Q6ZVX9 377 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 ZMIZ2Q8NF64 920 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 OSBPL2Q9H1P3 480 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 ZNF334Q9HCZ1 680 aaPredicted RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 SPHK2Q9NRA0 654 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 ZKSCAN5Q9Y2L8 839 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 TCF20Q9UGU0 1960 aaKnown RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 C1QTNF3-AMACRE9PGA6 284 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 MAP3K13O43283 966 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 SRFP11831 508 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 HMGA1P17096 107 aaKnown RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 COMTP21964 271 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 MIPP30301 263 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 FAM78AQ5JUQ0 283 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 HTR3DQ70Z44 454 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 CHST9Q7L1S5 443 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 SKA1Q96BD8 255 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 PPP1R16AQ96I34 528 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 ASB16Q96NS5 453 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 CINPQ9BW66 212 aaPredicted RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 NDRG2Q9UN36 371 aaKnown RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 WNT6Q9Y6F9 365 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 GBF1Q92538 1859 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 COL4A6Q14031 1691 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 MSI1O43347 362 aaKnown RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 TBX10O75333 385 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 BEST1O76090 585 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 GRM3Q14832 879 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 HEATR6Q6AI08 1181 aaKnown RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 CHPFQ8IZ52 775 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 CPXM2Q8N436 756 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 FLCNQ8NFG4 579 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 EXD1Q8NHP7 514 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 CASKIN2Q8WXE0 1202 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 DDX1Q92499 740 aaKnown RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 RNF25Q96BH1 459 aaPredicted RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 ZNF707Q96C28 371 aaPredicted RBP8.89□□□□□ -0.99
U2AF1-212ENST00000496462 TCEAL4Q96EI5 215 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 NPY6RQ99463 290 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 ZNF148Q9UQR1 794 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 NUMBLQ9Y6R0 609 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 PIAS3Q9Y6X2 628 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 PFDN6O15212 129 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 PJA2O43164 708 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 IL9P15248 144 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 FLT3P36888 993 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 GRIA2P42262 883 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 CXCR3P49682 368 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 USP46P62068 366 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 CTC1Q2NKJ3 1217 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 HGSNATQ68CP4 663 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 C4orf22Q6V702 233 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 ARHGEF18Q6ZSZ5 1173 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 GAREM2Q75VX8 874 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 CYP2S1Q96SQ9 504 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 PKMYT1Q99640 499 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 IL37Q9NZH6 218 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 SAR1BQ9Y6B6 198 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 ZDBF2Q9HCK1 2354 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 C2orf78A6NCI8 922 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 AP3B1O00203 1094 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 TNFRSF10BO14763 440 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 IGSF6O95976 241 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 OAS1P00973 400 aaKnown RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 VIPR2P41587 438 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 DLX2Q07687 328 aaPredicted RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 PKDCCQ504Y2 493 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 SETD3Q86TU7 594 aaPredicted RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 AHI1Q8N157 1196 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 CEP112Q8N8E3 955 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 TPCN2Q8NHX9 752 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 C1orf74Q96LT6 269 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 MAGEH1Q9H213 219 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 KLHL8Q9P2G9 620 aaPredicted RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 AJAP1Q9UKB5 411 aaPredicted RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 HEY1Q9Y5J3 304 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 PGRMC1O00264 195 aaKnown RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 TULP2O00295 520 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 DCXO43602 365 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 TBX18O95935 607 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 CES1P23141 567 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 MCM3P25205 808 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 NR2C2P49116 596 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 DYNLT1P63172 113 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 CAMK1Q14012 370 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 ARID5BQ14865 1188 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 C15orf59Q2T9L4 293 aaPredicted RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 PARP15Q460N3 678 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 HSF5Q4G112 596 aaPredicted RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 RAD9BQ6WBX8 426 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms