RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 LRMDAQ9H2I8 198 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 DENND2DQ9H6A0 471 aaPredicted RBP11.87□□□□□ -0.51
CDCA7-208ENST00000496441 ZFATQ9P243 1243 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 DERAQ9Y315 318 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 IQCA1LA6NCM1 817 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 H3BRJ5 948 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 FCHO1O14526 889 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 XPO1O14980 1071 aaKnown RBP11.87□□□□□ -0.51
CDCA7-208ENST00000496441 XPOTO43592 962 aaKnown RBP11.87□□□□□ -0.51
CDCA7-208ENST00000496441 ZFXP17010 805 aaPredicted RBP11.87□□□□□ -0.51
CDCA7-208ENST00000496441 PRKCHP24723 683 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 SARNPP82979 210 aaKnown RBP11.87□□□□□ -0.51
CDCA7-208ENST00000496441 CCDC15Q0P6D6 951 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 RINLQ6ZS11 566 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 ZNF467Q7Z7K2 595 aaPredicted RBP11.87□□□□□ -0.51
CDCA7-208ENST00000496441 ANKRD23Q86SG2 305 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 STK32AQ8WU08 396 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 WNT8BQ93098 351 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 CAB39LQ9H9S4 337 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 SSU72Q9NP77 194 aaKnown RBP11.87□□□□□ -0.51
CDCA7-208ENST00000496441 PCDHA11Q9Y5I1 949 aa11.87□□□□□ -0.51
CDCA7-208ENST00000496441 ZSWIM8A7E2V4 1837 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 LOC102724159A0A0B4J2E5 919 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 SDR42E2A6NKP2 422 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 F8W810 466 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 STK10O94804 968 aaKnown RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 UPP2O95045 317 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 ACADSBP45954 432 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 HUNKP57058 714 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 TPI1P60174 286 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 MXRA7P84157 204 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 PWP2Q15269 919 aaKnown RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 FSCN1Q16658 493 aaKnown RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 N4BP2L1Q5TBK1 243 aaPredicted RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 RASSF3Q86WH2 238 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 AGAP2Q99490 1192 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 NOP53Q9NZM5 478 aaKnown RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 STAP1Q9ULZ2 295 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 ST3GAL5Q9UNP4 418 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 MBLAC1A4D2B0 266 aaPredicted RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 ITM2AO43736 263 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 ALDOAP04075 364 aaKnown RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 DHRS4L1P0CG22 281 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 ZNF865P0CJ78 1059 aaPredicted RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 NR2C2P49116 596 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 RASSF2P50749 326 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 CLNS1AP54105 237 aaKnown RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 MAP2K5Q13163 448 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 DLG2Q15700 870 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 CTC1Q2NKJ3 1217 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 WLSQ5T9L3 541 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 RSPH3Q86UC2 560 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 NPWQ8N729 165 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 GTF3C2Q8WUA4 911 aaPredicted RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 ZNF669Q96BR6 464 aaPredicted RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 HSFY1Q96LI6 401 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 CADM1Q9BY67 442 aaKnown RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 PHACTR1Q9C0D0 580 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 XAB2Q9HCS7 855 aaKnown RBP11.86□□□□□ -0.51
CDCA7-208ENST00000496441 GDAP2Q9NXN4 497 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 CDY2AQ9Y6F7 541 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 USP3Q9Y6I4 520 aa11.86□□□□□ -0.51
CDCA7-208ENST00000496441 B3GAT3O94766 335 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 FYNP06241 537 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 BDNFP23560 247 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 CCND1P24385 295 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 TYK2P29597 1187 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 NOS2P35228 1153 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 PNPLA4P41247 253 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 BRCC3P46736 316 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 CDK16Q00536 496 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 WASHC5Q12768 1159 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 RIPK1Q13546 671 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 UBAP2LQ14157 1087 aaKnown RBP11.85□□□□□ -0.51
CDCA7-208ENST00000496441 CRYMQ14894 314 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 EML3Q32P44 896 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 FASTKD1Q53R41 847 aaKnown RBP11.85□□□□□ -0.51
CDCA7-208ENST00000496441 CERCAMQ5T4B2 595 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 STRADAQ7RTN6 431 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 MFSD3Q96ES6 412 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 CLPTM1LQ96KA5 538 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 SMOQ99835 787 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 SYT15Q9BQS2 421 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 RRAGCQ9HB90 399 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 XPNPEP3Q9NQH7 507 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDCA7-208ENST00000496441 MCM8Q9UJA3 840 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 C15orf41Q9Y2V0 281 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.85□□□□□ -0.51
CDCA7-208ENST00000496441 MEI4A8MW99 385 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 TRDMT1O14717 391 aaKnown RBP11.85□□□□□ -0.51
CDCA7-208ENST00000496441 ZBTB24O43167 697 aaPredicted RBP11.85□□□□□ -0.51
CDCA7-208ENST00000496441 DGKIO75912 1065 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 PTPN4P29074 926 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 SEMA5AQ13591 1074 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 HSP90AA5PQ58FG0 334 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 VWA5B1Q5TIE3 1220 aa11.85□□□□□ -0.51
CDCA7-208ENST00000496441 HNRNPABQ99729 332 aaKnown RBP11.85□□□□□ -0.51
CDCA7-208ENST00000496441 CPSF2Q9P2I0 782 aaKnown RBP11.85□□□□□ -0.51
CDCA7-208ENST00000496441 FAM159BA6NKW6 160 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms