RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 C3orf49Q96BT1 292 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 TBATAQ96M53 351 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 PAAF1Q9BRP4 392 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 PYM1Q9BRP8 204 aaKnown RBP4.24□□□□□ -1.73
CLK1-214ENST00000496205 NUDT22Q9BRQ3 303 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 RIC8AQ9NPQ8 531 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 STEAP1Q9UHE8 339 aa4.24□□□□□ -1.73
CLK1-214ENST00000496205 E7EVH7 732 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 AP4M1O00189 453 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 SOCS2O14508 198 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 PMPCBO75439 489 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 HEXIM1O94992 359 aaKnown RBP4.23□□□□□ -1.73
CLK1-214ENST00000496205 MBPP02686 304 aaPredicted RBP4.23□□□□□ -1.73
CLK1-214ENST00000496205 TMEM225BP0DP42 221 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 RXRAP19793 462 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 FPR3P25089 353 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 GKP32189 559 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 CYP2C18P33260 490 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 LIFRP42702 1097 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 MTHFSP49914 203 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 PLCD1P51178 756 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 POLE2P56282 527 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 EEFSECP57772 596 aaKnown RBP4.23□□□□□ -1.73
CLK1-214ENST00000496205 CYP4F2P78329 520 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 SF3A3Q12874 501 aaKnown RBP eCLIP4.23□□□□□ -1.735e-11■■■■■ 28
CLK1-214ENST00000496205 PDCLQ13371 301 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 KCNJ12Q14500 433 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 SMAD1Q15797 465 aaKnown RBP4.23□□□□□ -1.73
CLK1-214ENST00000496205 TAF12Q16514 161 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 SLC4A8Q2Y0W8 1093 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 P3H1Q32P28 736 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 ADCK5Q3MIX3 580 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 LRRC24Q50LG9 513 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 KIAA1161Q6NSJ0 714 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 CCDC144NLQ6NUI1 221 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 RAB11FIP2Q7L804 512 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.23□□□□□ -1.73
CLK1-214ENST00000496205 SMRP1Q8NCR6 262 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 USP13Q92995 863 aaPredicted RBP4.23□□□□□ -1.73
CLK1-214ENST00000496205 COG8Q96MW5 612 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 LENG8Q96PV6 779 aaPredicted RBP4.23□□□□□ -1.73
CLK1-214ENST00000496205 TWNKQ96RR1 684 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 NAP1L4Q99733 375 aaKnown RBP4.23□□□□□ -1.73
CLK1-214ENST00000496205 HERC2P3Q9BVR0 1158 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 CHODLQ9H9P2 273 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 KCNK9Q9NPC2 374 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 TRNAU1APQ9NX07 287 aaKnown RBP4.23□□□□□ -1.73
CLK1-214ENST00000496205 WWOXQ9NZC7 414 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 ZNF69Q9UC07 566 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 C19orf53Q9UNZ5 99 aaPredicted RBP4.23□□□□□ -1.73
CLK1-214ENST00000496205 ZBTB1Q9Y2K1 713 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 PCDHB2Q9Y5E7 798 aa4.23□□□□□ -1.73
CLK1-214ENST00000496205 A8MVJ9 347 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 E5RJQ4 531 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 STX16-NPEPL1H3BU86 382 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 STX16O14662 325 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 PRAMEF2O60811 474 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 NXPH3O95157 252 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 SERPINA4P29622 427 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 ACTR2P61160 394 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 BFSP2Q13515 415 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 CSHL1Q14406 222 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 PCID2Q5JVF3 399 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 ZNF618Q5T7W0 954 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 NAPRTQ6XQN6 538 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 Q6ZWC4 215 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 ANKS1BQ7Z6G8 1248 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 LRRC71Q8N4P6 559 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 ESX1Q8N693 406 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 PAF1Q8N7H5 531 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 OR6Y1Q8NGX8 325 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 CEP70Q8NHQ1 597 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 HMGB4Q8WW32 186 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 RSPRY1Q96DX4 576 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 MARK4Q96L34 752 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 ASB2Q96Q27 587 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 BRD8Q9H0E9 1235 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 RMI1Q9H9A7 625 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 TRIM36Q9NQ86 728 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 TMEM160Q9NX00 188 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 RAB21Q9UL25 225 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 DNAJC16Q9Y2G8 782 aa4.22□□□□□ -1.73
CLK1-214ENST00000496205 WDR17Q8IZU2 1322 aa4.21□□□□□ -1.73
CLK1-214ENST00000496205 AGAP5A6NIR3 686 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 J3KRW8 73 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 QSOX1O00391 747 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 KAT7O95251 611 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 PDE8BO95263 885 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 TNFAIP3P21580 790 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 THBS4P35443 961 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 GSTM5P46439 218 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 DIO1P49895 249 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 RAE1P78406 368 aaKnown RBP4.21□□□□□ -1.74
CLK1-214ENST00000496205 HOXA4Q00056 320 aaPredicted RBP4.21□□□□□ -1.74
CLK1-214ENST00000496205 EFR3AQ14156 821 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 AAK1Q2M2I8 961 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 RNASE12Q5GAN4 147 aaKnown RBP4.21□□□□□ -1.74
CLK1-214ENST00000496205 ZNF484Q5JVG2 852 aa4.21□□□□□ -1.74
CLK1-214ENST00000496205 INTS11Q5TA45 600 aaKnown RBP4.21□□□□□ -1.74
CLK1-214ENST00000496205 MIS18BP1Q6P0N0 1132 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms