RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CRABP2P29373 138 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 MIPP30301 263 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 CDK7P50613 346 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 SLC6A3Q01959 620 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 PPIL2Q13356 520 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 DPYSL3Q14195 570 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 DDHD1Q8NEL9 900 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 MKL1Q969V6 931 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 OSBPL10Q9BXB5 764 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.57■□□□□ 0.72
COL27A1-207ENST00000494090 UBP1Q9NZI7 540 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 GNG14A0A1W2PPG7 69 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 CASTOR2A6NHX0 329 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 RBAK-RBAKDNI3L0D1 243 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 ZW10O43264 779 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 HMGCRP04035 888 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 MGAT1P26572 445 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 TUFMP49411 452 aaKnown RBP19.57■□□□□ 0.72
COL27A1-207ENST00000494090 CDK16Q00536 496 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 ALDH6A1Q02252 535 aaKnown RBP19.57■□□□□ 0.72
COL27A1-207ENST00000494090 FAAP100Q0VG06 881 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 MFSD10Q14728 455 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 WDR48Q8TAF3 677 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 KLHL28Q9NXS3 571 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 ARHGAP23Q9P227 1491 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 MYL4P12829 197 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 ZNF7P17097 686 aaPredicted RBP19.57■□□□□ 0.72
COL27A1-207ENST00000494090 PPP2R1BP30154 601 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 PPATQ06203 517 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 PPP3CAQ08209 521 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 HAS1Q92839 578 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 VAT1Q99536 393 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 EPS8L2Q9H6S3 715 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 TBKBP1A7MCY6 615 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 XYLBO75191 536 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 MSH3P20585 1137 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 HALP42357 657 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 SCNN1BP51168 640 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 ALDH5A1P51649 535 aaPredicted RBP19.57■□□□□ 0.72
COL27A1-207ENST00000494090 SLC16A1P53985 500 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 TRIP4Q15650 581 aaPredicted RBP19.57■□□□□ 0.72
COL27A1-207ENST00000494090 ELMO3Q96BJ8 720 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 DNAJC19Q96DA6 116 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 PALMDQ9NP74 551 aa19.57■□□□□ 0.72
COL27A1-207ENST00000494090 A0A0U1RQJ8 604 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 TMEM150BA6NC51 233 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 EIF2S1P05198 315 aaKnown RBP19.56■□□□□ 0.72
COL27A1-207ENST00000494090 ZNF286BP0CG31 522 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 OASLQ15646 514 aaKnown RBP19.56■□□□□ 0.72
COL27A1-207ENST00000494090 MTSS1LQ765P7 747 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 YTHDF3Q7Z739 585 aaKnown RBP19.56■□□□□ 0.72
COL27A1-207ENST00000494090 KAT2BQ92831 832 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 STK39Q9UEW8 545 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 CASP5P51878 434 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 PLCL1Q15111 1095 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 SNX30Q5VWJ9 437 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 FOXR1Q6PIV2 292 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 TMEM86AQ8N2M4 240 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 AMHP03971 560 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 AMPD1P23109 780 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 YWHAQP27348 245 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 CCNG1P51959 295 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 PLIN5Q00G26 463 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 KYAT3Q6YP21 454 aaKnown RBP19.56■□□□□ 0.72
COL27A1-207ENST00000494090 PTAR1Q7Z6K3 402 aaPredicted RBP19.56■□□□□ 0.72
COL27A1-207ENST00000494090 CCDC3Q9BQI4 270 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 LACTBL1A8MY62 500 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 SERPINI2O75830 405 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 PSMD10O75832 226 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 ADIGQ0VDE8 80 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 PRMT9Q6P2P2 845 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 GLIS3Q8NEA6 775 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 BAP1Q92560 729 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 CATSPER2Q96P56 530 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 TRPV2Q9Y5S1 764 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 ASTN1O14525 1302 aa19.56■□□□□ 0.72
COL27A1-207ENST00000494090 RPN2P04844 631 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 KRT20P35900 424 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 IQSEC1Q6DN90 963 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 CKAP2Q8WWK9 683 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 TMEM237Q96Q45 408 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 TAS2R14Q9NYV8 317 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 ACTL7BQ9Y614 415 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 A0A096LPK6 155 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 RAD51BO15315 384 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 CYP2A6P11509 494 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-207ENST00000494090 KDELR1P24390 212 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 CACNA2D1P54289 1103 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 ITGB3BPQ13352 177 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-207ENST00000494090 POU6F1Q14863 301 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 IL17AQ16552 155 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 ZCCHC8Q6NZY4 707 aaKnown RBP19.55■□□□□ 0.72
COL27A1-207ENST00000494090 FOXR2Q6PJQ5 311 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 TMEM134Q9H6X4 195 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 C10orf88Q9H8K7 445 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 RGS18Q9NS28 235 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 LRCH1Q9Y2L9 728 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 NFASCO94856 1347 aa19.55■□□□□ 0.72
COL27A1-207ENST00000494090 CSDE1O75534 798 aaKnown RBP19.55■□□□□ 0.72
COL27A1-207ENST00000494090 DLG4P78352 724 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms