RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 RFX6Q8HWS3 928 aa20.02■□□□□ 0.8
USP39-218ENST00000493829 MAP7D3Q8IWC1 876 aa20.02■□□□□ 0.8
USP39-218ENST00000493829 BHMTQ93088 406 aa20.02■□□□□ 0.8
USP39-218ENST00000493829 PRICKLE1Q96MT3 831 aaPredicted RBP20.02■□□□□ 0.8
USP39-218ENST00000493829 CSPG4P5Q96PW8 444 aa20.02■□□□□ 0.8
USP39-218ENST00000493829 OSBPL2Q9H1P3 480 aa20.02■□□□□ 0.8
USP39-218ENST00000493829 TMEM51Q9NW97 253 aa20.02■□□□□ 0.8
USP39-218ENST00000493829 DOCK8Q8NF50 2099 aa20.02■□□□□ 0.8
USP39-218ENST00000493829 DAPK3O43293 454 aa20.01■□□□□ 0.79
USP39-218ENST00000493829 SGSHP51688 502 aa20.01■□□□□ 0.79
USP39-218ENST00000493829 SEMA3BQ13214 749 aa20.01■□□□□ 0.79
USP39-218ENST00000493829 TFDP3Q5H9I0 405 aa20.01■□□□□ 0.79
USP39-218ENST00000493829 TANGO2Q6ICL3 276 aa20.01■□□□□ 0.79
USP39-218ENST00000493829 RFX8Q6ZV50 586 aa20.01■□□□□ 0.79
USP39-218ENST00000493829 CFAP52Q8N1V2 620 aa20.01■□□□□ 0.79
USP39-218ENST00000493829 PBKQ96KB5 322 aa20.01■□□□□ 0.79
USP39-218ENST00000493829 RPRD1AQ96P16 312 aaPredicted RBP20.01■□□□□ 0.79
USP39-218ENST00000493829 PRMT1Q99873 361 aaKnown RBP20.01■□□□□ 0.79
USP39-218ENST00000493829 KIF9Q9HAQ2 790 aa20.01■□□□□ 0.79
USP39-218ENST00000493829 MPP6Q9NZW5 540 aa20.01■□□□□ 0.79
USP39-218ENST00000493829 MFHAS1Q9Y4C4 1052 aa20.01■□□□□ 0.79
USP39-218ENST00000493829 hCG_1818297A0A087WSY0 165 aa20■□□□□ 0.79
USP39-218ENST00000493829 E2F8A0AVK6 867 aa20■□□□□ 0.79
USP39-218ENST00000493829 HEPACAM2A8MVW5 462 aa20■□□□□ 0.79
USP39-218ENST00000493829 LAMP2P13473 410 aa20■□□□□ 0.79
USP39-218ENST00000493829 IL4RP24394 825 aa20■□□□□ 0.79
USP39-218ENST00000493829 EPHB2P29323 1055 aa20■□□□□ 0.79
USP39-218ENST00000493829 MLLT6P55198 1093 aaPredicted RBP20■□□□□ 0.79
USP39-218ENST00000493829 ADCY2Q08462 1091 aa20■□□□□ 0.79
USP39-218ENST00000493829 ANKRD20A8PQ5CZ79 823 aa20■□□□□ 0.79
USP39-218ENST00000493829 ADGRF1Q5T601 910 aa20■□□□□ 0.79
USP39-218ENST00000493829 FBXL22Q6P050 247 aa20■□□□□ 0.79
USP39-218ENST00000493829 HTR3DQ70Z44 454 aa20■□□□□ 0.79
USP39-218ENST00000493829 TSC1Q92574 1164 aa20■□□□□ 0.79
USP39-218ENST00000493829 IGSF8Q969P0 613 aa20■□□□□ 0.79
USP39-218ENST00000493829 HAUS1Q96CS2 278 aa20■□□□□ 0.79
USP39-218ENST00000493829 TBC1D31Q96DN5 1066 aa20■□□□□ 0.79
USP39-218ENST00000493829 ZNF670Q9BS34 389 aa20■□□□□ 0.79
USP39-218ENST00000493829 OSBPL8Q9BZF1 889 aa20■□□□□ 0.79
USP39-218ENST00000493829 RRAGDQ9NQL2 400 aaPredicted RBP20■□□□□ 0.79
USP39-218ENST00000493829 NEU3Q9UQ49 428 aa20■□□□□ 0.79
USP39-218ENST00000493829 TCRBV7S2A1N4TA0A589 114 aa20■□□□□ 0.79
USP39-218ENST00000493829 FGGP02679 453 aa20■□□□□ 0.79
USP39-218ENST00000493829 AMPD1P23109 780 aa20■□□□□ 0.79
USP39-218ENST00000493829 CETN2P41208 172 aa20■□□□□ 0.79
USP39-218ENST00000493829 GRM2Q14416 872 aa20■□□□□ 0.79
USP39-218ENST00000493829 MANEALQ5VSG8 457 aa20■□□□□ 0.79
USP39-218ENST00000493829 PARM1Q6UWI2 310 aa20■□□□□ 0.79
USP39-218ENST00000493829 LRRC31Q6UY01 552 aa20■□□□□ 0.79
USP39-218ENST00000493829 OTOP3Q7RTS5 596 aa20■□□□□ 0.79
USP39-218ENST00000493829 FAM71BQ8TC56 605 aa20■□□□□ 0.79
USP39-218ENST00000493829 TRAF3IP1Q8TDR0 691 aaPredicted RBP20■□□□□ 0.79
USP39-218ENST00000493829 ZFYVE19Q96K21 471 aa20■□□□□ 0.79
USP39-218ENST00000493829 MAK16Q9BXY0 300 aaKnown RBP20■□□□□ 0.79
USP39-218ENST00000493829 ZFP14Q9HCL3 533 aa20■□□□□ 0.79
USP39-218ENST00000493829 ARHGEF4Q9NR80 690 aa20■□□□□ 0.79
USP39-218ENST00000493829 WEE1P30291 646 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 RPS24P62847 133 aaKnown RBP19.99■□□□□ 0.79
USP39-218ENST00000493829 CCDC181Q5TID7 509 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 TRIM68Q6AZZ1 485 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 TPGS1Q6ZTW0 290 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 TFAP2DQ7Z6R9 452 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 ZNF683Q8IZ20 524 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 TDRD5Q8NAT2 981 aaKnown RBP19.99■□□□□ 0.79
USP39-218ENST00000493829 NETO2Q8NC67 525 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 PCDH19Q8TAB3 1148 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 BPIFB1Q8TDL5 484 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 UBE2Q2Q8WVN8 375 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 FGF14Q92915 247 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 C1orf74Q96LT6 269 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 ETNK2Q9NVF9 386 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 STIM2Q9P246 746 aa19.99■□□□□ 0.79
USP39-218ENST00000493829 SPTBN5Q9NRC6 3674 aaKnown RBP19.99■□□□□ 0.79
USP39-218ENST00000493829 C2CD4DB7Z1M9 353 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 CNTN5O94779 1100 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 LATS1O95835 1130 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 COPS2P61201 443 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 MTA1Q13330 715 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 DPYSQ14117 519 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 PPP2R5EQ16537 467 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 LONRF2Q1L5Z9 754 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 LEXMQ3ZCV2 418 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 ARTNQ5T4W7 220 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 PTCRAQ6ISU1 281 aaPredicted RBP19.98■□□□□ 0.79
USP39-218ENST00000493829 VITQ6UXI7 678 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 PQLC3Q8N755 202 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 AZIN2Q96A70 460 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 ASIC4Q96FT7 647 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 RPGRIP1Q96KN7 1286 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 RNF157Q96PX1 679 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 FAM118BQ9BPY3 351 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 DDX50Q9BQ39 737 aaKnown RBP19.98■□□□□ 0.79
USP39-218ENST00000493829 PLA2G2FQ9BZM2 168 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 LINC00597Q9H2U6 94 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 ZNF510Q9Y2H8 683 aa19.98■□□□□ 0.79
USP39-218ENST00000493829 ZFP37Q9Y6Q3 630 aaPredicted RBP19.98■□□□□ 0.79
USP39-218ENST00000493829 PGRMC1O00264 195 aaKnown RBP19.97■□□□□ 0.79
USP39-218ENST00000493829 CST8O60676 142 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 MAP3K6O95382 1288 aa19.97■□□□□ 0.79
USP39-218ENST00000493829 TCF3P15923 654 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms