RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ERBB3P21860 1342 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 PLOD3O60568 738 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 NPTXRO95502 500 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 PRKAR2AP13861 404 aaKnown RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 MCAMP43121 646 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 NFIAQ12857 509 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 DGCR6Q14129 220 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ATP13A5Q4VNC0 1218 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 SAMD4BQ5PRF9 694 aaKnown RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 GRTP1Q5TC63 336 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 BROXQ5VW32 411 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 BICRALQ6AI39 1079 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 IRGCQ6NXR0 463 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 SHC4Q6S5L8 630 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 NT5DC3Q86UY8 548 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ADSSL1Q8N142 457 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 FBXO39Q8N4B4 442 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 BHMTQ93088 406 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 FAM136AQ96C01 138 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 C8orf4Q9NR00 106 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ABCB10Q9NRK6 738 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 TUBA8Q9NY65 449 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-221ENST00000493795 ZNF232Q9UNY5 417 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 INVSQ9Y283 1065 aa8.03□□□□□ -1.12
BRCA1-221ENST00000493795 TMCC2O75069 709 aa8.02□□□□□ -1.12
BRCA1-221ENST00000493795 FARP2O94887 1054 aaPredicted RBP8.02□□□□□ -1.12
BRCA1-221ENST00000493795 MYBP10242 640 aa8.02□□□□□ -1.12
BRCA1-221ENST00000493795 ATP5F1P24539 256 aaPredicted RBP8.02□□□□□ -1.12
BRCA1-221ENST00000493795 PIK3CGP48736 1102 aa8.02□□□□□ -1.12
BRCA1-221ENST00000493795 CYP2A13Q16696 494 aa8.02□□□□□ -1.12
BRCA1-221ENST00000493795 INTS11Q5TA45 600 aaKnown RBP8.02□□□□□ -1.12
BRCA1-221ENST00000493795 FAM117BQ6P1L5 589 aa8.02□□□□□ -1.12
BRCA1-221ENST00000493795 SLFN11Q7Z7L1 901 aa8.02□□□□□ -1.12
BRCA1-221ENST00000493795 ACSF2Q96CM8 615 aaPredicted RBP8.02□□□□□ -1.12
BRCA1-221ENST00000493795 TRIM9Q9C026 710 aa8.02□□□□□ -1.12
BRCA1-221ENST00000493795 NMRAL1Q9HBL8 299 aa8.02□□□□□ -1.12
BRCA1-221ENST00000493795 EURLQ9NYK6 297 aa8.02□□□□□ -1.12
BRCA1-221ENST00000493795 TRIM10Q9UDY6 481 aa8.02□□□□□ -1.12
BRCA1-221ENST00000493795 RSL24D1Q9UHA3 163 aaKnown RBP8.02□□□□□ -1.12
BRCA1-221ENST00000493795 SRP68Q9UHB9 627 aaKnown RBP8.02□□□□□ -1.12
BRCA1-221ENST00000493795 TDRKHQ9Y2W6 561 aaKnown RBP8.02□□□□□ -1.12
BRCA1-221ENST00000493795 KCNH1O95259 989 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 SERPINE1P05121 402 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 PDHBP11177 359 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 ME2P23368 584 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 ALDH7A1P49419 539 aaKnown RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 AP1S1P61966 158 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 PYHIN1Q6K0P9 492 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 DLG3Q92796 817 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 FBXO32Q969P5 355 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.02□□□□□ -1.134e-6■■■■■ 27.4
BRCA1-221ENST00000493795 TBC1D30Q9Y2I9 924 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 FLT1P17948 1338 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 DNMBPQ6XZF7 1577 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 TBX3O15119 743 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 MDM4O15151 490 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 PCDH8O95206 1070 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 STAG3L1P0CL83 205 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 FGFR2P21802 821 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 CRABP2P29373 138 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 NEK3P51956 506 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 AMPD2Q01433 879 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 MGAT5Q09328 741 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 EFR3AQ14156 821 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 FAM187BQ17R55 369 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 CBWD3Q5JTY5 395 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 CBWD5Q5RIA9 395 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 MILR1Q7Z6M3 343 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 DEPDC4Q8N2C3 294 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 ANKS1AQ92625 1134 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 KLHL32Q96NJ5 620 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 PLEKHG4BQ96PX9 1271 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 CRISPLD1Q9H336 500 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 UBQLN1Q9UMX0 589 aaKnown RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 GPATCH8Q9UKJ3 1502 aaKnown RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 C21orf2O43822 256 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 OR56A5P0C7T3 313 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 S100A3P33764 101 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 ATN1P54259 1190 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 SGCGQ13326 291 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 TFDP3Q5H9I0 405 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 SYT12Q8IV01 421 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 MEIOBQ8N635 442 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 PSMA8Q8TAA3 256 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 HNRNPLLQ8WVV9 542 aaKnown RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 SKA1Q96BD8 255 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 ASB2Q96Q27 587 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 MKNK1Q9BUB5 465 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 PLGRKTQ9HBL7 147 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 NEUROD4Q9HD90 331 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 MID1IP1Q9NPA3 183 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 C12orf4Q9NQ89 552 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 AGPAT5Q9NUQ2 364 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 DPP3Q9NY33 737 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 SLAIN2Q9P270 581 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 XPR1Q9UBH6 696 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 GTF3C4Q9UKN8 822 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 BAIAP2Q9UQB8 552 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 ERGIC3Q9Y282 383 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 IGSF9BQ9UPX0 1349 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms