RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ACDQ96AP0 544 aa10.8□□□□□ -0.68
TRAPPC12-222ENST00000493792 ZDHHC4Q9NPG8 344 aa10.8□□□□□ -0.68
TRAPPC12-222ENST00000493792 METTL5Q9NRN9 209 aaKnown RBP10.8□□□□□ -0.68
TRAPPC12-222ENST00000493792 POLR3BQ9NW08 1133 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC12-222ENST00000493792 ADAM22Q9P0K1 906 aa10.8□□□□□ -0.68
TRAPPC12-222ENST00000493792 PKD1L2Q7Z442 2459 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 ANTXRLA6NF34 631 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 K7EQS6 105 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 TBL1XO60907 577 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 PENKP01210 267 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 CALB1P05937 261 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 SKILP12757 684 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 MMP8P22894 467 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 CCR1P32246 355 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 WASP42768 502 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 TNFRSF4P43489 277 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 PXNP49023 591 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 ZNF445P59923 1031 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 DMC1Q14565 340 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 FYB2Q5VWT5 728 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 RAP1GAP2Q684P5 730 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 NADSYN1Q6IA69 706 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 IRF2BP2Q7Z5L9 587 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 FAM217AQ8IXS0 508 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 LGI2Q8N0V4 545 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 ALLCQ8N6M5 410 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 EMC1Q8N766 993 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 ZNF513Q8N8E2 541 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 USP33Q8TEY7 942 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 BTN2A3PQ96KV6 586 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 HHIPQ96QV1 700 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 SELENOOQ9BVL4 669 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 EDEM3Q9BZQ6 932 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 NUCKS1Q9H1E3 243 aaKnown RBP10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 SMOC1Q9H4F8 434 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 HAUS4Q9H6D7 363 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 RRN3Q9NYV6 651 aa10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 XPO7Q9UIA9 1087 aaKnown RBP10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 ANKRD11Q6UB99 2663 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC12-222ENST00000493792 LAMA1P25391 3075 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 CCDC163A0A0D9SF12 145 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 ANKRD62A6NC57 917 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 F5H5T6 163 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 GIPC1O14908 333 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 EPN2O95208 641 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 GJB6O95452 261 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 TOP3BO95985 862 aaKnown RBP10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 F9P00740 461 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 TPM1P09493 284 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 TFE3P19532 575 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 TACR2P21452 398 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 HOXD9P28356 352 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 SLC6A4P31645 630 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 FLT3P36888 993 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 SCNN1AP37088 669 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 PBX1P40424 430 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 SGSHP51688 502 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 MRPS21P82921 87 aaKnown RBP10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 ATP11AP98196 1134 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 CENPCQ03188 943 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 CDO1Q16878 200 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 FAM133BQ5BKY9 247 aaKnown RBP10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 FIGNQ5HY92 759 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 E4F1Q66K89 784 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 SDE2Q6IQ49 451 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 ACAD10Q6JQN1 1059 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 DNAJC24Q6P3W2 148 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 CEP68Q76N32 757 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 KBTBD6Q86V97 674 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 CHPFQ8IZ52 775 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 CFAP52Q8N1V2 620 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 CARNMT1Q8N4J0 409 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 C12orf50Q8NA57 414 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 TXNDC5Q8NBS9 432 aaKnown RBP10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 HJURPQ8NCD3 748 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 UCMAQ8WVF2 138 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 GAB3Q8WWW8 586 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 IQCDQ96DY2 449 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 ERLEC1Q96DZ1 483 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 SLC39A13Q96H72 371 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 CFAP57Q96MR6 1250 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 TBCBQ99426 244 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 CIPCQ9C0C6 399 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 TTYH3Q9C0H2 523 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 SIK2Q9H0K1 926 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 WDCPQ9H6R7 721 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 AIPL1Q9NZN9 384 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 STOML2Q9UJZ1 356 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 CLEC4EQ9ULY5 219 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 LUC7L2Q9Y383 392 aaKnown RBP10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 KIAA1549LQ6ZVL6 1849 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 WDFY3Q8IZQ1 3526 aa10.78□□□□□ -0.68
TRAPPC12-222ENST00000493792 DMXL2Q8TDJ6 3036 aa10.77□□□□□ -0.68
TRAPPC12-222ENST00000493792 IGF2RP11717 2491 aa10.77□□□□□ -0.69
TRAPPC12-222ENST00000493792 A0A1W2PQJ5 194 aa10.77□□□□□ -0.69
TRAPPC12-222ENST00000493792 SRRM3A6NNA2 597 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC12-222ENST00000493792 KCNU1A8MYU2 1149 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms