RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 IFNAR2P48551 515 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 TAS2R40P59535 323 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 FCHO2Q0JRZ9 810 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 NR1H3Q13133 447 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 HTR4Q13639 388 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 KRT81Q14533 505 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 MPP7Q5T2T1 576 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 TANGO2Q6ICL3 276 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 CYP4V2Q6ZWL3 525 aaPredicted RBP12.85□□□□□ -0.35
SNX17-208ENST00000493711 CHSY1Q86X52 802 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 SLC35F6Q8N357 371 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 EXD1Q8NHP7 514 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 FAM71BQ8TC56 605 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 OSCP1Q8WVF1 389 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 HSPH1Q92598 858 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 ATP2A3Q93084 1043 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 PEBP4Q96S96 227 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 TRMT61BQ9BVS5 477 aaKnown RBP12.85□□□□□ -0.35
SNX17-208ENST00000493711 SIK2Q9H0K1 926 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 DHX35Q9H5Z1 703 aaKnown RBP12.85□□□□□ -0.35
SNX17-208ENST00000493711 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNX17-208ENST00000493711 DUS2Q9NX74 493 aaKnown RBP12.85□□□□□ -0.35
SNX17-208ENST00000493711 PPARGC1AQ9UBK2 798 aaKnown RBP12.85□□□□□ -0.35
SNX17-208ENST00000493711 ATG2AQ2TAZ0 1938 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 CTAGE9A4FU28 777 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 C2CD4DB7Z1M9 353 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 CHADO15335 359 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 FGF10O15520 208 aaPredicted RBP12.84□□□□□ -0.35
SNX17-208ENST00000493711 NFATC1O95644 943 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 ADH1CP00326 375 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 KRT1P04264 644 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 TACR2P21452 398 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 GJC1P36383 396 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 PEX5P50542 639 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 CDH6P55285 790 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 ZXDBP98169 803 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 AUHQ13825 339 aaKnown RBP12.84□□□□□ -0.35
SNX17-208ENST00000493711 C5orf22Q49AR2 442 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 MPPE1Q53F39 396 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 MS4A13Q5J8X5 152 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 NYAP1Q6ZVC0 841 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 CCDC117Q8IWD4 279 aaPredicted RBP12.84□□□□□ -0.35
SNX17-208ENST00000493711 ADHFE1Q8IWW8 467 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 HJURPQ8NCD3 748 aaPredicted RBP12.84□□□□□ -0.35
SNX17-208ENST00000493711 TTC16Q8NEE8 873 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 RNF166Q96A37 237 aaPredicted RBP12.84□□□□□ -0.35
SNX17-208ENST00000493711 TBC1D31Q96DN5 1066 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 RPGRIP1Q96KN7 1286 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 NAPGQ99747 312 aaPredicted RBP12.84□□□□□ -0.35
SNX17-208ENST00000493711 PRMT1Q99873 361 aaKnown RBP12.84□□□□□ -0.35
SNX17-208ENST00000493711 ZNF670Q9BS34 389 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 GOLPH3Q9H4A6 298 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 EFR3BQ9Y2G0 817 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 HCN4Q9Y3Q4 1203 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 HYOU1Q9Y4L1 999 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 HS3ST4Q9Y661 456 aa12.84□□□□□ -0.35
SNX17-208ENST00000493711 IGLV3-10A0A075B6K4 115 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 LRRD1A4D1F6 860 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 DRGXA6NNA5 263 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 LOC730098B7Z3J9 87 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 EEF2KO00418 725 aaKnown RBP12.83□□□□□ -0.36
SNX17-208ENST00000493711 DAPK3O43293 454 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 TNNT1P13805 278 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 TCF4P15884 667 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 PRLRP16471 622 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 ZFXP17010 805 aaPredicted RBP12.83□□□□□ -0.36
SNX17-208ENST00000493711 KDELR1P24390 212 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 CASQ1P31415 396 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 PTPN7P35236 360 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 OXCT1P55809 520 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 TPI1P60174 286 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 TFF2Q03403 129 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 SEMA3BQ13214 749 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 SMTNL2Q2TAL5 461 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 FAM133BQ5BKY9 247 aaKnown RBP12.83□□□□□ -0.36
SNX17-208ENST00000493711 KCNT1Q5JUK3 1230 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 PIK3R6Q5UE93 754 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 RAP1GAP2Q684P5 730 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 PARM1Q6UWI2 310 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 VITQ6UXI7 678 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 BBS7Q8IWZ6 715 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 ADGRG2Q8IZP9 1017 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 LGI2Q8N0V4 545 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 C17orf53Q8N3J3 647 aaPredicted RBP12.83□□□□□ -0.36
SNX17-208ENST00000493711 CPA6Q8N4T0 437 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 TMA16Q96EY4 203 aaKnown RBP12.83□□□□□ -0.36
SNX17-208ENST00000493711 PBKQ96KB5 322 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 RPRD1AQ96P16 312 aaPredicted RBP12.83□□□□□ -0.36
SNX17-208ENST00000493711 KXD1Q9BQD3 176 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 TLR10Q9BXR5 811 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 MAK16Q9BXY0 300 aaKnown RBP12.83□□□□□ -0.36
SNX17-208ENST00000493711 CARD9Q9H257 536 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 CATSPERBQ9H7T0 1116 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 PCDH18Q9HCL0 1135 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 NUMBLQ9Y6R0 609 aa12.83□□□□□ -0.36
SNX17-208ENST00000493711 MYO9BQ13459 2157 aa12.82□□□□□ -0.36
SNX17-208ENST00000493711 ESPNB1AK53 854 aa12.82□□□□□ -0.36
SNX17-208ENST00000493711 E9PAM4 449 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms