RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 FIBINQ8TAL6 211 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 P2RY11Q96G91 374 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 NPY6RQ99463 290 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 GABRG3Q99928 467 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 ZDHHC4Q9NPG8 344 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 ADAM22Q9P0K1 906 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 KIAA1522Q9P206 1035 aaPredicted RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 THAP10Q9P2Z0 257 aaPredicted RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 GGA2Q9UJY4 613 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 GMEB2Q9UKD1 530 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 CLEC4EQ9ULY5 219 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 SMG5Q9UPR3 1016 aaKnown RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 STON1Q9Y6Q2 735 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 TCRBV21S2A2A0A5A6 115 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 FAM170AA1A519 330 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 ANKRD62A6NC57 917 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 LRRC53A6NM62 1247 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 MAP3K13O43283 966 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 MOCS3O95396 460 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 TPM3P06753 285 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 RETP07949 1114 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 CHRM1P11229 460 aaPredicted RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 PABPC1P11940 636 aaKnown RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 KRT3P12035 628 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 POLR2EP19388 210 aaKnown RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 HLA-FP30511 346 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 HOXC13P31276 330 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 CXCR3P49682 368 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 SGSHP51688 502 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 OXCT1P55809 520 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 RPS24P62847 133 aaKnown RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 CENPCQ03188 943 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 SRSF5Q13243 272 aaKnown RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 SLC12A1Q13621 1099 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 CDH18Q13634 790 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 STARD3Q14849 445 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 ASIC2Q16515 512 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 LPAL2Q16609 132 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 CLEC16AQ2KHT3 1053 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 C2CD6Q53TS8 623 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 FIGNQ5HY92 759 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 TTC39BQ5VTQ0 682 aaPredicted RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 ACAD10Q6JQN1 1059 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 IRF2BP2Q7Z5L9 587 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 KIAA0907Q7Z7F0 614 aaPredicted RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 PHF13Q86YI8 300 aaPredicted RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 CFAP52Q8N1V2 620 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 MDGA1Q8NFP4 955 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 HMGB4Q8WW32 186 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 BAP1Q92560 729 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 NT5C3BQ969T7 300 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 IQCDQ96DY2 449 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 PGAP3Q96FM1 320 aaPredicted RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 LOXL4Q96JB6 756 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 ZC3H10Q96K80 434 aaKnown RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 SPACA7Q96KW9 195 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 PPP1R9BQ96SB3 815 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 PCDHB18PQ96TA0 734 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 ACOX2Q99424 681 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 TBCBQ99426 244 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 C11orf70Q9BRQ4 267 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 SELENOOQ9BVL4 669 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 TPSD1Q9BZJ3 242 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 TKTL2Q9H0I9 626 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 SIK2Q9H0K1 926 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 NUCKS1Q9H1E3 243 aaKnown RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 TSPY26PQ9H489 355 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 ABCB8Q9NUT2 735 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 CACNA2D2Q9NY47 1150 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 AIPL1Q9NZN9 384 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 XPO7Q9UIA9 1087 aaKnown RBP7.22□□□□□ -1.25
TOP3A-207ENST00000493648 TMEM59LQ9UK28 342 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 HCN2Q9UL51 889 aa7.22□□□□□ -1.25
TOP3A-207ENST00000493648 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.21□□□□□ -1.26
TOP3A-207ENST00000493648 A0A1W2PQF6 199 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 SIGLEC16A6NMB1 481 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 WASH3PC4AMC7 463 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 CBFA2T2O43439 604 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 ZNF217O75362 1048 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 PAGE1O75459 146 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 LUC7L3O95232 432 aaKnown RBP7.21□□□□□ -1.26
TOP3A-207ENST00000493648 ASLP04424 464 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 EPHX1P07099 455 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 DLDP09622 509 aaKnown RBP7.21□□□□□ -1.26
TOP3A-207ENST00000493648 PDGFRAP16234 1089 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 DESP17661 470 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 SDC4P31431 198 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 CD70P32970 193 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 RDXP35241 583 aaKnown RBP7.21□□□□□ -1.26
TOP3A-207ENST00000493648 FLT3P36888 993 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 NNMTP40261 264 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 IL12RB1P42701 662 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 GSCP56915 257 aaPredicted RBP7.21□□□□□ -1.26
TOP3A-207ENST00000493648 ST8SIA6P61647 398 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 ATP11AP98196 1134 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 KLHL30Q0D2K2 578 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 PTP4A2Q12974 167 aa7.21□□□□□ -1.26
TOP3A-207ENST00000493648 ZNF177Q13360 481 aaPredicted RBP7.21□□□□□ -1.26
TOP3A-207ENST00000493648 ENPP2Q13822 863 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms