RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 TTC9BQ8N6N2 239 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 PAF1Q8N7H5 531 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 SMRP1Q8NCR6 262 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 BBOF1Q8ND07 529 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 ACTRT1Q8TDG2 376 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 SH3RF2Q8TEC5 729 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 CLEC4CQ8WTT0 213 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 ATXN2LQ8WWM7 1075 aaKnown RBP5.5□□□□□ -1.53
NEK4-205ENST00000493199 CASKIN2Q8WXE0 1202 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 RSAD2Q8WXG1 361 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 FGF13Q92913 245 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 USP13Q92995 863 aaPredicted RBP5.5□□□□□ -1.53
NEK4-205ENST00000493199 ACDQ96AP0 544 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 ELSPBP1Q96BH3 223 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 SHDQ96IW2 340 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 FCRL2Q96LA5 508 aaPredicted RBP5.5□□□□□ -1.53
NEK4-205ENST00000493199 RNF157Q96PX1 679 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 OSBPL9Q96SU4 736 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 VAT1Q99536 393 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 C2orf49Q9BVC5 232 aaPredicted RBP5.5□□□□□ -1.53
NEK4-205ENST00000493199 KLF16Q9BXK1 252 aaPredicted RBP5.5□□□□□ -1.53
NEK4-205ENST00000493199 OSBPL8Q9BZF1 889 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 TSPYL1Q9H0U9 437 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 CRISPLD1Q9H336 500 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 CCSER2Q9H7U1 834 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 BRD9Q9H8M2 597 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 NMUR1Q9HB89 426 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 TRPV4Q9HBA0 871 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 KIAA1522Q9P206 1035 aaPredicted RBP5.5□□□□□ -1.53
NEK4-205ENST00000493199 CFAP97Q9P2B7 532 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 CDC23Q9UJX2 597 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 TTC7AQ9ULT0 858 aaPredicted RBP5.5□□□□□ -1.53
NEK4-205ENST00000493199 FZD10Q9ULW2 581 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 PLA2G4CQ9UP65 541 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 MRPS17Q9Y2R5 130 aaKnown RBP5.5□□□□□ -1.53
NEK4-205ENST00000493199 REXO2Q9Y3B8 237 aaKnown RBP5.5□□□□□ -1.53
NEK4-205ENST00000493199 DUSP10Q9Y6W6 482 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 TSC2P49815 1807 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 VWA8A3KMH1 1905 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 PTPRSQ13332 1948 aa5.5□□□□□ -1.53
NEK4-205ENST00000493199 KIAA1671Q9BY89 1806 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 C2orf78A6NCI8 922 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 E9PAM4 449 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 APOC4-APOC2K7ER74 178 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 LEFTY2O00292 366 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 MAN2B1O00754 1011 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 ENC1O14682 589 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 CHADO15335 359 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 PSMD3O43242 534 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 RAMP2O60895 175 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 STC2O76061 302 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 VNN2O95498 520 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 IGLV3-25P01717 112 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 APOC2P02655 101 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 FGGP02679 453 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 ASLP04424 464 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 RHOCP08134 193 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 TACR2P21452 398 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 CHRNA3P32297 505 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 HSPA9P38646 679 aaKnown RBP5.49□□□□□ -1.53
NEK4-205ENST00000493199 EIF2DP41214 584 aaKnown RBP5.49□□□□□ -1.53
NEK4-205ENST00000493199 MAPK8P45983 427 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 RECQLP46063 649 aaPredicted RBP5.49□□□□□ -1.53
NEK4-205ENST00000493199 CDR1P51861 262 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 HDAC4P56524 1084 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 CYP4F8P98187 520 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 DHX34Q14147 1143 aaKnown RBP5.49□□□□□ -1.53
NEK4-205ENST00000493199 GRM3Q14832 879 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 POLD3Q15054 466 aaPredicted RBP5.49□□□□□ -1.53
NEK4-205ENST00000493199 CCDC85BQ15834 202 aaPredicted RBP5.49□□□□□ -1.53
NEK4-205ENST00000493199 CCNG2Q16589 344 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 LEXMQ3ZCV2 418 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 PARP15Q460N3 678 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 ANKRD20A8PQ5CZ79 823 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 KCNT1Q5JUK3 1230 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 PRSS36Q5K4E3 855 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 KAZNQ674X7 775 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 IL31Q6EBC2 164 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 ITPRIPL1Q6GPH6 555 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 SPOCD1Q6ZMY3 1216 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 RFX8Q6ZV50 586 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 NYAP1Q6ZVC0 841 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 HFE2Q6ZVN8 426 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 SYDE1Q6ZW31 735 aaPredicted RBP5.49□□□□□ -1.53
NEK4-205ENST00000493199 TRMT11Q7Z4G4 463 aaKnown RBP5.49□□□□□ -1.53
NEK4-205ENST00000493199 PCGF5Q86SE9 256 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 TMC8Q8IU68 726 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 MFN1Q8IWA4 741 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 CCDC105Q8IYK2 499 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 ZDHHC14Q8IZN3 488 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 HS6ST3Q8IZP7 471 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 LGI2Q8N0V4 545 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 CNPY4Q8N129 248 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 C12orf76Q8N812 135 aaPredicted RBP5.49□□□□□ -1.53
NEK4-205ENST00000493199 CCDC89Q8N998 374 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 LRRC57Q8N9N7 239 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 CCNYQ8ND76 341 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 ATL2Q8NHH9 583 aa5.49□□□□□ -1.53
NEK4-205ENST00000493199 GABPB2Q8TAK5 448 aaPredicted RBP5.49□□□□□ -1.53
NEK4-205ENST00000493199 SHKBP1Q8TBC3 707 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms