RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 ZNF425Q6IV72 752 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 RANBP10Q6VN20 620 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 KYAT3Q6YP21 454 aaKnown RBP4.41□□□□□ -1.7
VTA1-204ENST00000491881 MOGAT3Q86VF5 341 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 CHSY1Q86X52 802 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 C2CD5Q86YS7 1000 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 FTSJ3Q8IY81 847 aaKnown RBP4.41□□□□□ -1.7
VTA1-204ENST00000491881 SRFBP1Q8NEF9 429 aaKnown RBP4.41□□□□□ -1.7
VTA1-204ENST00000491881 CSGALNACT1Q8TDX6 532 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 GCC1Q96CN9 775 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 RITA1Q96K30 269 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 ASB2Q96Q27 587 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 TRIM2Q9C040 744 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 GAR1Q9NY12 217 aaKnown RBP4.41□□□□□ -1.7
VTA1-204ENST00000491881 KCND3Q9UK17 655 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 SLC12A4Q9UP95 1085 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 GPR52Q9Y2T5 361 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 HEMK1Q9Y5R4 338 aaPredicted RBP4.41□□□□□ -1.7
VTA1-204ENST00000491881 SPATA31A1Q5TZJ5 1347 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 MBD3L5A6NJ08 208 aaPredicted RBP4.4□□□□□ -1.71
VTA1-204ENST00000491881 C3orf70A6NLC5 250 aaPredicted RBP4.4□□□□□ -1.71
VTA1-204ENST00000491881 E7EVH7 732 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 FAM155BO75949 473 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 CYP2D6P10635 497 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 PEPDP12955 493 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 NDUFS1P28331 727 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 MCM2P49736 904 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 RBM5P52756 815 aaKnown RBP eCLIP4.4□□□□□ -1.71
VTA1-204ENST00000491881 FAM3BP58499 235 aaPredicted RBP4.4□□□□□ -1.71
VTA1-204ENST00000491881 SLC14A1Q13336 389 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 TAF12Q16514 161 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 GLE1Q53GS7 698 aaKnown RBP4.4□□□□□ -1.71
VTA1-204ENST00000491881 KIAA1614Q5VZ46 1190 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 SYNE3Q6ZMZ3 975 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 SYT13Q7L8C5 426 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 PTF1AQ7RTS3 328 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 SUGP1Q8IWZ8 645 aaKnown RBP4.4□□□□□ -1.71
VTA1-204ENST00000491881 SPPL3Q8TCT6 385 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 TRMT61AQ96FX7 289 aaKnown RBP4.4□□□□□ -1.71
VTA1-204ENST00000491881 KAZALD1Q96I82 304 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 NUAK2Q9H093 628 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 PRDM16Q9HAZ2 1276 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 G6PC2Q9NQR9 355 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 TMLHEQ9NVH6 421 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 ASNSD1Q9NWL6 643 aa4.4□□□□□ -1.71
VTA1-204ENST00000491881 SIRT4Q9Y6E7 314 aaPredicted RBP4.4□□□□□ -1.71
VTA1-204ENST00000491881 MANSC4A6NHS7 340 aaPredicted RBP4.39□□□□□ -1.71
VTA1-204ENST00000491881 AGAP5A6NIR3 686 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 TK1P04183 234 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 HOXB6P17509 224 aaKnown RBP4.39□□□□□ -1.71
VTA1-204ENST00000491881 ATF7P17544 494 aaPredicted RBP4.39□□□□□ -1.71
VTA1-204ENST00000491881 STAT6P42226 847 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 MAPK9P45984 424 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 PCP4P48539 62 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
VTA1-204ENST00000491881 ACTR2P61160 394 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 TUBA4AP68366 448 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 PDCLQ13371 301 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 SRSF7Q16629 238 aaKnown RBP eCLIP4.39□□□□□ -1.71
VTA1-204ENST00000491881 PROSER3Q2NL68 480 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 FBXO47Q5MNV8 452 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 LAS2Q8IYD9 372 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 TMEM57Q8N5G2 664 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 ADPRHL1Q8NDY3 354 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 HASPINQ8TF76 798 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 ASB12Q8WXK4 309 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 DDB2Q92466 427 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 RILPL2Q969X0 211 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 SDCCAG3Q96C92 435 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 PIGSQ96S52 555 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 SENP7Q9BQF6 1050 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 PYM1Q9BRP8 204 aaKnown RBP4.39□□□□□ -1.71
VTA1-204ENST00000491881 FEM1BQ9UK73 627 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 PCDHA10Q9Y5I2 948 aa4.39□□□□□ -1.71
VTA1-204ENST00000491881 CCDC189A1A4V9 331 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 LINC01548A6NM66 108 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 B9A039 149 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 PRRT4C9JH25 899 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 EIF3FO00303 357 aaPredicted RBP4.38□□□□□ -1.71
VTA1-204ENST00000491881 PRYO14603 147 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 SEPT4O43236 478 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 HNRNPRO43390 633 aaKnown RBP4.38□□□□□ -1.71
VTA1-204ENST00000491881 HEXIM1O94992 359 aaKnown RBP4.38□□□□□ -1.71
VTA1-204ENST00000491881 TFRCP02786 760 aaKnown RBP4.38□□□□□ -1.71
VTA1-204ENST00000491881 CYP3A4P08684 503 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 NHLRC4P0CG21 123 aaPredicted RBP4.38□□□□□ -1.71
VTA1-204ENST00000491881 CYP2A6P11509 494 aaPredicted RBP4.38□□□□□ -1.71
VTA1-204ENST00000491881 RXRAP19793 462 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 TACR3P29371 465 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 HOXD12P35452 270 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 RCAN1P53805 252 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 FOXL2P58012 376 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 GAB1Q13480 694 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 ZNF268Q14587 947 aaPredicted RBP4.38□□□□□ -1.71
VTA1-204ENST00000491881 SMAD1Q15797 465 aaKnown RBP4.38□□□□□ -1.71
VTA1-204ENST00000491881 EZH2Q15910 746 aaKnown RBP4.38□□□□□ -1.71
VTA1-204ENST00000491881 TMEM88Q6PEY1 159 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 SLC39A5Q6ZMH5 540 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 FSIP1Q8NA03 581 aa4.38□□□□□ -1.71
VTA1-204ENST00000491881 CEP70Q8NHQ1 597 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms