RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 CDKAL1Q5VV42 579 aa32.52■■■□□ 2.8
LDB1-204ENST00000490751 C11orf57Q6ZUT1 292 aaPredicted RBP32.52■■■□□ 2.8
LDB1-204ENST00000490751 NAA15Q9BXJ9 866 aaKnown RBP32.52■■■□□ 2.8
LDB1-204ENST00000490751 UCHL3P15374 230 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 DPP6P42658 865 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 SNX16P57768 344 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 CDK17Q00537 523 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 EIF4EBP2Q13542 120 aaPredicted RBP32.51■■■□□ 2.79
LDB1-204ENST00000490751 RAP1GAP2Q684P5 730 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 OLFML1Q6UWY5 402 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 METTL3Q86U44 580 aaKnown RBP32.51■■■□□ 2.79
LDB1-204ENST00000490751 CHSY1Q86X52 802 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 TMPRSS6Q8IU80 811 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 CFAP52Q8N1V2 620 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 CARNMT1Q8N4J0 409 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 FIBINQ8TAL6 211 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 VPS16Q9H269 839 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 PDCL3Q9H2J4 239 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 SYNCQ9H7C4 482 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 PLA2G4CQ9UP65 541 aa32.51■■■□□ 2.79
LDB1-204ENST00000490751 CYP11B1P15538 503 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 COPAP53621 1224 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 ZNF33AQ06730 810 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 KRT31Q15323 416 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 TRIM61Q5EBN2 209 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 PPM1JQ5JR12 505 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 SASS6Q6UVJ0 657 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 LGI2Q8N0V4 545 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 DDX1Q92499 740 aaKnown RBP32.5■■■□□ 2.79
LDB1-204ENST00000490751 SIPA1Q96FS4 1042 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 BTN2A3PQ96KV6 586 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 TMEM245Q9H330 911 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 SLTMQ9NWH9 1034 aaKnown RBP eCLIP32.5■■■□□ 2.79
LDB1-204ENST00000490751 DDIT4Q9NX09 232 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 EVLQ9UI08 416 aaPredicted RBP32.5■■■□□ 2.79
LDB1-204ENST00000490751 PILRBQ9UKJ0 227 aa32.5■■■□□ 2.79
LDB1-204ENST00000490751 LAMA1P25391 3075 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 GON4LQ3T8J9 2241 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 SYNJ2BP-COX16A0A087WUM0 186 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 ATP5BP06576 529 aaKnown RBP32.49■■■□□ 2.79
LDB1-204ENST00000490751 DLDP09622 509 aaKnown RBP32.49■■■□□ 2.79
LDB1-204ENST00000490751 POLR2EP19388 210 aaKnown RBP32.49■■■□□ 2.79
LDB1-204ENST00000490751 TACR2P21452 398 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 IRX4P78413 519 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 LMAN2Q12907 356 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 PTPRNQ16849 979 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 CACUL1Q86Y37 369 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 SLC41A1Q8IVJ1 513 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 ZNF366Q8N895 744 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 ATP6V0D2Q8N8Y2 350 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 TMEM35BQ8NCS4 154 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 PRCCQ92733 491 aaPredicted RBP32.49■■■□□ 2.79
LDB1-204ENST00000490751 LMLNQ96KR4 655 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 COX16Q9P0S2 106 aa32.49■■■□□ 2.79
LDB1-204ENST00000490751 USP36Q9P275 1121 aaKnown RBP32.49■■■□□ 2.79
LDB1-204ENST00000490751 TM4SF5O14894 197 aa32.48■■■□□ 2.79
LDB1-204ENST00000490751 NDUFS2O75306 463 aa32.48■■■□□ 2.79
LDB1-204ENST00000490751 SLC6A3Q01959 620 aa32.48■■■□□ 2.79
LDB1-204ENST00000490751 CDH18Q13634 790 aa32.48■■■□□ 2.79
LDB1-204ENST00000490751 PEAR1Q5VY43 1037 aaPredicted RBP32.48■■■□□ 2.79
LDB1-204ENST00000490751 SLC26A9Q7LBE3 791 aa32.48■■■□□ 2.79
LDB1-204ENST00000490751 CCDC117Q8IWD4 279 aaPredicted RBP32.48■■■□□ 2.79
LDB1-204ENST00000490751 HSPA12BQ96MM6 686 aa32.48■■■□□ 2.79
LDB1-204ENST00000490751 STK33Q9BYT3 514 aa32.48■■■□□ 2.79
LDB1-204ENST00000490751 ITM2CQ9NQX7 267 aa32.48■■■□□ 2.79
LDB1-204ENST00000490751 ANO10Q9NW15 660 aa32.48■■■□□ 2.79
LDB1-204ENST00000490751 FANCLQ9NW38 375 aa32.48■■■□□ 2.79
LDB1-204ENST00000490751 SLC12A6Q9UHW9 1150 aa32.48■■■□□ 2.79
LDB1-204ENST00000490751 SPTBN2O15020 2390 aa32.47■■■□□ 2.79
LDB1-204ENST00000490751 PI4KAP42356 2102 aa32.47■■■□□ 2.79
LDB1-204ENST00000490751 C4orf47A7E2U8 309 aa32.47■■■□□ 2.79
LDB1-204ENST00000490751 KCNU1A8MYU2 1149 aa32.47■■■□□ 2.79
LDB1-204ENST00000490751 F8VZ95 297 aa32.47■■■□□ 2.79
LDB1-204ENST00000490751 DAB1O75553 588 aa32.47■■■□□ 2.79
LDB1-204ENST00000490751 LUC7L3O95232 432 aaKnown RBP32.47■■■□□ 2.79
LDB1-204ENST00000490751 TPM2P07951 284 aa32.47■■■□□ 2.79
LDB1-204ENST00000490751 CD6P30203 668 aa32.47■■■□□ 2.79
LDB1-204ENST00000490751 HOXD12P35452 270 aa32.47■■■□□ 2.79
LDB1-204ENST00000490751 CAMK2GQ13555 558 aaPredicted RBP32.47■■■□□ 2.79
LDB1-204ENST00000490751 TAF3Q5VWG9 929 aa32.47■■■□□ 2.79
LDB1-204ENST00000490751 OR2T3Q8NH03 318 aa32.47■■■□□ 2.79
LDB1-204ENST00000490751 NUSAP1Q9BXS6 441 aaKnown RBP32.47■■■□□ 2.79
LDB1-204ENST00000490751 SLC2A3P11169 496 aa32.46■■■□□ 2.79
LDB1-204ENST00000490751 KCNA4P22459 653 aa32.46■■■□□ 2.79
LDB1-204ENST00000490751 CDH5P33151 784 aaPredicted RBP32.46■■■□□ 2.79
LDB1-204ENST00000490751 STX1AQ16623 288 aa32.46■■■□□ 2.79
LDB1-204ENST00000490751 FSCBQ5H9T9 825 aa32.46■■■□□ 2.79
LDB1-204ENST00000490751 ZNF397Q8NF99 534 aaPredicted RBP32.46■■■□□ 2.79
LDB1-204ENST00000490751 RNF34Q969K3 372 aa32.46■■■□□ 2.79
LDB1-204ENST00000490751 GANQ9H2C0 597 aa32.46■■■□□ 2.79
LDB1-204ENST00000490751 TMEM9BQ9NQ34 198 aa32.46■■■□□ 2.79
LDB1-204ENST00000490751 WSB2Q9NYS7 404 aaPredicted RBP32.46■■■□□ 2.79
LDB1-204ENST00000490751 INTS6Q9UL03 887 aaKnown RBP32.46■■■□□ 2.79
LDB1-204ENST00000490751 F5H5T6 163 aa32.45■■■□□ 2.79
LDB1-204ENST00000490751 MBD3O95983 291 aa32.45■■■□□ 2.79
LDB1-204ENST00000490751 ACADMP11310 421 aa32.45■■■□□ 2.79
LDB1-204ENST00000490751 ABCB4P21439 1286 aa32.45■■■□□ 2.79
LDB1-204ENST00000490751 CCR1P32246 355 aa32.45■■■□□ 2.79
LDB1-204ENST00000490751 KLK7P49862 253 aa32.45■■■□□ 2.79
LDB1-204ENST00000490751 TPMTP51580 245 aa32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms