RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 AARSP49588 968 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 PNLIPRP1P54315 467 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 SLC37A1P57057 533 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 YPEL5P62699 121 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 HSF1Q00613 529 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 POSTNQ15063 836 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 SEC23BQ15437 767 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 ADCK5Q3MIX3 580 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 GORABQ5T7V8 394 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 JMJD6Q6NYC1 403 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 NEK8Q86SG6 692 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 OR6Y1Q8NGX8 325 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 PRSS3P2Q8NHM4 247 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 ZNF398Q8TD17 642 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 TRMT61AQ96FX7 289 aaKnown RBP5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 HTATIP2Q9BUP3 242 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 QTRT1Q9BXR0 403 aaKnown RBP5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 SFXN1Q9H9B4 322 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 TMLHEQ9NVH6 421 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 KIF17Q9P2E2 1029 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 FRMD4BQ9Y2L6 1034 aa5.49□□□□□ -1.53
HMGB1P38-201ENST00000490557 EMSYQ7Z589 1322 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 SMIM35A0A1B0GVV1 85 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 AGAP5A6NIR3 686 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 KCNU1A8MYU2 1149 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 H0Y3Z8 333 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 KRT38O76015 456 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 PLAUP00749 431 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 CYP3A4P08684 503 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 PRR35P0CG20 571 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 ST6GAL1P15907 406 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 FBLP22087 321 aaKnown RBP5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 CST5P28325 142 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 ABCG1P45844 678 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 CDK7P50613 346 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 RCAN1P53805 252 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 SLC12A2P55011 1212 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 STIM1Q13586 685 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 CCDC142Q17RM4 750 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 GALNTL6Q49A17 601 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 SLC9C1Q4G0N8 1177 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 TTC22Q5TAA0 569 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 SYNE3Q6ZMZ3 975 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 NKAPQ8N5F7 415 aaKnown RBP5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 NTN5Q8WTR8 489 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 PIGSQ96S52 555 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 ERVK-5Q9HDB9 667 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 PCDHA10Q9Y5I2 948 aa5.48□□□□□ -1.53
HMGB1P38-201ENST00000490557 C16orf96A6NNT2 1141 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 E7EVH7 732 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 RRHO14718 337 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 CNTN5O94779 1100 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 ALDOCP09972 364 aaKnown RBP5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 DHRS4L1P0CG22 281 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 SFPQP23246 707 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 PPM1FP49593 454 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 RBM5P52756 815 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 FAM3BP58499 235 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 DMWDQ09019 674 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 SUPT20HL1Q3ZLR7 823 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 MTX3Q5HYI7 312 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 MEX3CQ5U5Q3 659 aaKnown RBP5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 DGAT2L7PQ6IED9 249 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 RBM44Q6ZP01 1051 aaKnown RBP5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 TFAP2DQ7Z6R9 452 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 SRRM1Q8IYB3 904 aaKnown RBP5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 FAM47BQ8NA70 645 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 AFG1LQ8WV93 481 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 DDX23Q9BUQ8 820 aaKnown RBP5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 TM2D2Q9BX73 214 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 KRTAP4-5Q9BYR2 181 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 MYH16Q9H6N6 1097 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 SRP68Q9UHB9 627 aaKnown RBP5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 KCND3Q9UK17 655 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 COPG1Q9Y678 874 aaKnown RBP5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 SPATA31A5Q5VU36 1347 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 SPATA31A7Q8IWB4 1347 aa5.47□□□□□ -1.53
HMGB1P38-201ENST00000490557 OVOL3O00110 214 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 SEPT4O43236 478 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 HNRNPRO43390 633 aaKnown RBP5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 KAT7O95251 611 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 VEGFAP15692 232 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 TFEBP19484 476 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 TGM2P21980 687 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 RPS6KB1P23443 525 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 ATP5F1P24539 256 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 IDUAP35475 653 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 MMP13P45452 471 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 CPA2P48052 419 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZNF84P51523 738 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 PRKAA2P54646 552 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 FOXL2P58012 376 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 RPS13P62277 151 aaKnown RBP5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 SHC2P98077 582 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZNF91Q05481 1191 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 DHX8Q14562 1220 aaKnown RBP5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 TAF5Q15542 800 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 GPR162Q16538 588 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 LIPMQ5VYY2 423 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 SLC2A7Q6PXP3 512 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms