RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 GTF2E2P29084 291 aaKnown RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 CACNB2Q08289 660 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 FOXD4Q12950 439 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 MTG1Q9BT17 334 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 PRDM5Q9NQX1 630 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 ADGRB2O60241 1585 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 FDPSP14324 419 aaKnown RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 ME2P23368 584 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 CCR3P51677 355 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 COLGALT1Q8NBJ5 622 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 RNFT2Q96EX2 444 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 CHST12Q9NRB3 414 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 TRIM10Q9UDY6 481 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 ZNF862O60290 1169 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 TCN1P20061 433 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 POLD2P49005 469 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 STX4Q12846 297 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 R3HDM1Q15032 1099 aaKnown RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 GALNTL6Q49A17 601 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 CRELD2Q6UXH1 353 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 CCDC81Q6ZN84 652 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 SH3BP5LQ7L8J4 393 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 KCNMB4Q86W47 210 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 MCOLN2Q8IZK6 566 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 TMEM159Q96B96 161 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 TMEM79Q9BSE2 394 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 ADI1Q9BV57 179 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 GEMIN8Q9NWZ8 242 aaKnown RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 FMN2Q9NZ56 1722 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 TEX28O15482 410 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 ERVK-24P63145 666 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 NR6A1Q15406 480 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 FBXO39Q8N4B4 442 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 ZNF526Q8TF50 670 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 HEXDCQ8WVB3 486 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 CHORDC1Q9UHD1 332 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 ZSCAN5CA6NGD5 496 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 TBKBP1A7MCY6 615 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 RBAK-RBAKDNI3L0D1 243 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 HNMTP50135 292 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 DPY30Q9C005 99 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 UBP1Q9NZI7 540 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 HAO1Q9UJM8 370 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 SNX13Q9Y5W8 968 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 IL6P05231 212 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 SSTR3P32745 418 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 SMARCB1Q12824 385 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 CDC16Q13042 620 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 INO80DQ53TQ3 878 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 SGO1Q5FBB7 561 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 RTL3Q8N8U3 475 aaKnown RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 HTR3CQ8WXA8 447 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 ACTR8Q9H981 624 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 GGA3Q9NZ52 723 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 SNAP91O60641 907 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 SGPL1O95470 568 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 XIAPP98170 497 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 TMC3Q7Z5M5 1100 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 EXOC3L1Q86VI1 746 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 UNC93AQ86WB7 457 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 DHFR2Q86XF0 187 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 HDAC7Q8WUI4 952 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 RUSC1Q9BVN2 902 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 IARS2Q9NSE4 1012 aaKnown RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 MORF4L1Q9UBU8 362 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 IL1R1P14778 569 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 ACO1P21399 889 aaKnown RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 SLC16A1P53985 500 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 COX10Q12887 443 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 XPO1O14980 1071 aaKnown RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 IGSF6O95976 241 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 SLC45A4Q5BKX6 768 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 MZT2AQ6P582 158 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 FAM92BQ6ZTR7 304 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 WDR36Q8NI36 951 aaKnown RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 RXFP2Q8WXD0 754 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 OXCT2Q9BYC2 517 aaPredicted RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 DNAJC16Q9Y2G8 782 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 TMEM131LA2VDJ0 1609 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 ERCC6L2Q5T890 1561 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 LOC100653049A0A140TA62 436 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 ERN1O75460 977 aaKnown RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 OGNP20774 298 aaKnown RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 SHROOM1Q2M3G4 852 aaPredicted RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 ARMC4Q5T2S8 1044 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 RACGAP1Q9H0H5 632 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 GPRC5DQ9NZD1 345 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 PCDHB5Q9Y5E4 795 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 FAM205AQ6ZU69 1335 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 EFCAB10A6NFE3 127 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 ANKRD65E5RJM6 399 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 ACADMP11310 421 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 LAMTOR4Q0VGL1 99 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 NDUFAF6Q330K2 333 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 GALNT18Q6P9A2 607 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 USP45Q70EL2 814 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 LPCAT2Q7L5N7 544 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 CAMK1DQ8IU85 385 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 AP3S1Q92572 193 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 PTCD3Q96EY7 689 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms