RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 FOXQ1Q9C009 403 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 RAB6CQ9H0N0 254 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 ARHGEF4Q9NR80 690 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 SIT1Q9Y3P8 196 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 HS3ST4Q9Y661 456 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 SHISA7A6NL88 538 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 PRR33A8MZF0 331 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 PRPSAP2O60256 369 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 AOC1P19801 751 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 HOXD9P28356 352 aaPredicted RBP11.24□□□□□ -0.61
VPS13D-210ENST00000489961 PCK1P35558 622 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 SLC6A11P48066 632 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 DGKGP49619 791 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 SGSHP51688 502 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 CLCN5P51795 746 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 KDSRQ06136 332 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 SCAPQ12770 1279 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 AUHQ13825 339 aaKnown RBP11.24□□□□□ -0.61
VPS13D-210ENST00000489961 EFHC2Q5JST6 749 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 CWF19L1Q69YN2 538 aaKnown RBP11.24□□□□□ -0.61
VPS13D-210ENST00000489961 ASTLQ6HA08 431 aaPredicted RBP11.24□□□□□ -0.61
VPS13D-210ENST00000489961 GRAMD4Q6IC98 578 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 FBXL22Q6P050 247 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 C12orf40Q86WS4 652 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 LRRC8AQ8IWT6 810 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 FBXL6Q8N531 539 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 CCDC185Q8N715 623 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 NIPA2Q8N8Q9 360 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 CCDC26Q8TAB7 109 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 SLC35G2Q8TBE7 412 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 RPRD1AQ96P16 312 aaPredicted RBP11.24□□□□□ -0.61
VPS13D-210ENST00000489961 OSBPL2Q9H1P3 480 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 ANLNQ9NQW6 1124 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 TMPRSS4Q9NRS4 437 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 STIM2Q9P246 746 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 VANGL2Q9ULK5 521 aa11.24□□□□□ -0.61
VPS13D-210ENST00000489961 A0A1B0GVM2 712 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 TBC1D3BA6NDS4 549 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 TCAF2A6NFQ2 919 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 H0Y626 953 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 I6L893 689 aaPredicted RBP11.23□□□□□ -0.61
VPS13D-210ENST00000489961 ARHGAP6O43182 974 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 LRCH4O75427 683 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 MTA2O94776 668 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 KAT7O95251 611 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 PTMAP06454 111 aaKnown RBP11.23□□□□□ -0.61
VPS13D-210ENST00000489961 MIPP30301 263 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 GGCXP38435 758 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 GRIA2P42262 883 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 ARHGAP25P42331 645 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 SSR1P43307 286 aaKnown RBP11.23□□□□□ -0.61
VPS13D-210ENST00000489961 MAGEA9P43362 315 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 NOP2P46087 812 aaKnown RBP11.23□□□□□ -0.61
VPS13D-210ENST00000489961 RPS24P62847 133 aaKnown RBP11.23□□□□□ -0.61
VPS13D-210ENST00000489961 NRG1Q02297 640 aaPredicted RBP11.23□□□□□ -0.61
VPS13D-210ENST00000489961 CDH18Q13634 790 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 TCEAL1Q15170 157 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 FBXO43Q4G163 708 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 NAIF1Q69YI7 327 aaPredicted RBP11.23□□□□□ -0.61
VPS13D-210ENST00000489961 FSTL4Q6MZW2 842 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 KIAA1328Q86T90 577 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 MFN1Q8IWA4 741 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 CCDC105Q8IYK2 499 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 CFAP52Q8N1V2 620 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 CARNMT1Q8N4J0 409 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 TERB1Q8NA31 727 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 MYEOVQ96EZ4 313 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 BTBD6Q96KE9 485 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 LMAN1LQ9HAT1 526 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 OSGEPQ9NPF4 335 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 C11orf16Q9NQ32 467 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 OR12D3Q9UGF7 316 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 PCSK1NQ9UHG2 260 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 FBXO10Q9UK96 956 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 FZD10Q9ULW2 581 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 USP18Q9UMW8 372 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 MTF2Q9Y483 593 aaPredicted RBP11.23□□□□□ -0.61
VPS13D-210ENST00000489961 SNX10Q9Y5X0 201 aa11.23□□□□□ -0.61
VPS13D-210ENST00000489961 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.22□□□□□ -0.61
VPS13D-210ENST00000489961 A0A0A6YYK5 440 aaPredicted RBP11.22□□□□□ -0.61
VPS13D-210ENST00000489961 TMEM110-MUSTN1A8MSY1 372 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 E9PAM4 449 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 SRGAP2O75044 1071 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 CLDN11O75508 207 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 PROSCO94903 275 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 LUC7L3O95232 432 aaKnown RBP11.22□□□□□ -0.61
VPS13D-210ENST00000489961 EGFP01133 1207 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 CISD3P0C7P0 127 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 CHRNB1P11230 501 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 MAN1A1P33908 653 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 TNFRSF4P43489 277 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 RPS9P46781 194 aaKnown RBP11.22□□□□□ -0.61
VPS13D-210ENST00000489961 VAV2P52735 878 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 OXCT1P55809 520 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 ZNF177Q13360 481 aaPredicted RBP11.22□□□□□ -0.61
VPS13D-210ENST00000489961 CCINQ13939 588 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 MESDQ14696 234 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 HADHQ16836 314 aaKnown RBP11.22□□□□□ -0.61
VPS13D-210ENST00000489961 C5orf22Q49AR2 442 aa11.22□□□□□ -0.61
VPS13D-210ENST00000489961 ERMARDQ5T6L9 678 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms