RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 SERGEFQ9UGK8 458 aa9.64□□□□□ -0.87
SSBP1-212ENST00000489378 CLEC18AA5D8T8 446 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 EFSO43281 561 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 OPA1O60313 960 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 SDC3O75056 442 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 TACC1O75410 805 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 KRT38O76015 456 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 STC2O76061 302 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 DNTTP04053 509 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 ABCD1P33897 745 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 DDIT3P35638 169 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 GALCP54803 685 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 ZBTB16Q05516 673 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 GOLGA8FQ08AF8 430 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 GOLGA8DPQ0D2H9 430 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 CLN3Q13286 438 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 NNTQ13423 1086 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 SERINC3Q13530 473 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 ARL13BQ3SXY8 428 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 FNDC3BQ53EP0 1204 aaKnown RBP9.63□□□□□ -0.87
SSBP1-212ENST00000489378 NCEH1Q6PIU2 408 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 CLEC18BQ6UXF7 455 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 ZNF720Q7Z2F6 126 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 CLEC18CQ8NCF0 446 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 ZMIZ2Q8NF64 920 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 FBXO18Q8NFZ0 1043 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 ANKRD36BP1Q96IX9 119 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 DEPDC7Q96QD5 511 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 ZMYND15Q9H091 742 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 DMAP1Q9NPF5 467 aaPredicted RBP9.63□□□□□ -0.87
SSBP1-212ENST00000489378 TLR8Q9NR97 1041 aaKnown RBP9.63□□□□□ -0.87
SSBP1-212ENST00000489378 MAN2B2Q9Y2E5 1009 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 R3HCC1Q9Y3T6 440 aaKnown RBP9.63□□□□□ -0.87
SSBP1-212ENST00000489378 C2CD3Q4AC94 2353 aa9.63□□□□□ -0.87
SSBP1-212ENST00000489378 PMS2P1A4D2B8 440 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 VWA3AA6NCI4 1184 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 A8MXQ7 604 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 TLR4O00206 839 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 BEST1O76090 585 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 FAM87AP0C7U9 286 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 PDIA4P13667 645 aaKnown RBP9.62□□□□□ -0.87
SSBP1-212ENST00000489378 TIMP2P16035 220 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 DAB2P98082 770 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 ARID5AQ03989 594 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 ZSCAN23Q3MJ62 389 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 TTC31Q49AM3 519 aaPredicted RBP9.62□□□□□ -0.87
SSBP1-212ENST00000489378 C3orf38Q5JPI3 329 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 SFR1Q86XK3 245 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 GANCQ8TET4 914 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 EXTL1Q92935 676 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 PSMG3-AS1Q96PY0 264 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 SMOQ99835 787 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 CBWD1Q9BRT8 395 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 MED10Q9BTT4 135 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 STRA6Q9BX79 667 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 PABPC3Q9H361 631 aaKnown RBP9.62□□□□□ -0.87
SSBP1-212ENST00000489378 MTG2Q9H4K7 406 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 PCIF1Q9H4Z3 704 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 ERVMER34-1Q9H9K5 563 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 NMUR1Q9HB89 426 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 KRT82Q9NSB4 513 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 COMMD8Q9NX08 183 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 SEPT3Q9UH03 358 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 SATB2Q9UPW6 733 aa9.62□□□□□ -0.87
SSBP1-212ENST00000489378 CACNA1DQ01668 2161 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 TDRD6O60522 2096 aaKnown RBP9.61□□□□□ -0.87
SSBP1-212ENST00000489378 DOCK9Q9BZ29 2069 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 A0A1B0GVM2 712 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 ENO4A6NNW6 628 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 C10orf142B7Z368 130 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 CYP26A1O43174 497 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 TIMM44O43615 452 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 CST3P01034 146 aaPredicted RBP9.61□□□□□ -0.87
SSBP1-212ENST00000489378 TNNC2P02585 160 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 RBMS1P29558 406 aaKnown RBP9.61□□□□□ -0.87
SSBP1-212ENST00000489378 PLA2G4AP47712 749 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 ZNF211Q13398 564 aaPredicted RBP9.61□□□□□ -0.87
SSBP1-212ENST00000489378 E2F5Q15329 346 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 ZNF776Q68DI1 518 aaPredicted RBP9.61□□□□□ -0.87
SSBP1-212ENST00000489378 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 DYMQ7RTS9 669 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 GPRIN1Q7Z2K8 1008 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 CCDC83Q8IWF9 413 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 SLC25A45Q8N413 288 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 HVCN1Q96D96 273 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 PRR11Q96HE9 360 aaPredicted RBP9.61□□□□□ -0.87
SSBP1-212ENST00000489378 SERAC1Q96JX3 654 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 SLC46A1Q96NT5 459 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 OSBPL2Q9H1P3 480 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 CAAP1Q9H8G2 361 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 FBXL12Q9NXK8 326 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 MAP10Q9P2G4 905 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 ATP8B3O60423 1300 aa9.61□□□□□ -0.87
SSBP1-212ENST00000489378 COL27A1Q8IZC6 1860 aaPredicted RBP9.61□□□□□ -0.87
SSBP1-212ENST00000489378 A0A1W2PQH9 124 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 AP1G2O75843 785 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 LDHAP00338 332 aaKnown RBP9.6□□□□□ -0.87
SSBP1-212ENST00000489378 HMBSP08397 361 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 RARGP13631 454 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 GARTP22102 1010 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms