RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 C11orf70Q9BRQ4 267 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 NUP58Q9BVL2 599 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 EDEM3Q9BZQ6 932 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 WDCPQ9H6R7 721 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 ABCB8Q9NUT2 735 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 CACNA2D2Q9NY47 1150 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 ADAM22Q9P0K1 906 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 THAP10Q9P2Z0 257 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-218ENST00000489037 GGA2Q9UJY4 613 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 CLEC4EQ9ULY5 219 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 STON1Q9Y6Q2 735 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 MAP3K13O43283 966 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 TPM3P06753 285 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 RETP07949 1114 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 HLA-FP30511 346 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 SGSHP51688 502 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 RPS24P62847 133 aaKnown RBP14.78□□□□□ -0.04
BRCA1-218ENST00000489037 EIF4EBP2Q13542 120 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-218ENST00000489037 ASIC2Q16515 512 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 CLEC16AQ2KHT3 1053 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 SLC25A52Q3SY17 297 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 C2CD6Q53TS8 623 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 ACBD5Q5T8D3 534 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-218ENST00000489037 TTC39BQ5VTQ0 682 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-218ENST00000489037 SFMBT2Q5VUG0 894 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 ARCQ7LC44 396 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 CFAP52Q8N1V2 620 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 MDGA1Q8NFP4 955 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 SLC30A5Q8TAD4 765 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 FIBINQ8TAL6 211 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 P2RY11Q96G91 374 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 PPP1R9BQ96SB3 815 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 ACOX2Q99424 681 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 GABRG3Q99928 467 aa14.78□□□□□ -0.04
BRCA1-218ENST00000489037 METTL5Q9NRN9 209 aaKnown RBP14.78□□□□□ -0.04
BRCA1-218ENST00000489037 KIAA1522Q9P206 1035 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-218ENST00000489037 GPR179Q6PRD1 2367 aa14.77□□□□□ -0.04
BRCA1-218ENST00000489037 CEP192Q8TEP8 1941 aa14.77□□□□□ -0.04
BRCA1-218ENST00000489037 ANKRD62A6NC57 917 aa14.77□□□□□ -0.05
BRCA1-218ENST00000489037 LUC7L3O95232 432 aaKnown RBP14.77□□□□□ -0.05
BRCA1-218ENST00000489037 CHRM1P11229 460 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-218ENST00000489037 UNGP13051 313 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-218ENST00000489037 DESP17661 470 aa14.77□□□□□ -0.05
BRCA1-218ENST00000489037 OXCT1P55809 520 aa14.77□□□□□ -0.05
BRCA1-218ENST00000489037 CENPCQ03188 943 aa14.77□□□□□ -0.05
BRCA1-218ENST00000489037 ZNF234Q14588 700 aa14.77□□□□□ -0.05
BRCA1-218ENST00000489037 FNDC3BQ53EP0 1204 aaKnown RBP14.77□□□□□ -0.05
BRCA1-218ENST00000489037 MBLAC2Q68D91 279 aa14.77□□□□□ -0.05
BRCA1-218ENST00000489037 SERPINA13PQ6UXR4 307 aa14.77□□□□□ -0.05
BRCA1-218ENST00000489037 FAM160A2Q8N612 972 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-218ENST00000489037 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.77□□□□□ -0.05
BRCA1-218ENST00000489037 PGAP3Q96FM1 320 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-218ENST00000489037 LOXL4Q96JB6 756 aa14.77□□□□□ -0.05
BRCA1-218ENST00000489037 PRICKLE1Q96MT3 831 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-218ENST00000489037 RPRD1AQ96P16 312 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-218ENST00000489037 SELENOOQ9BVL4 669 aa14.77□□□□□ -0.05
BRCA1-218ENST00000489037 TKTL2Q9H0I9 626 aa14.77□□□□□ -0.05
BRCA1-218ENST00000489037 XPO7Q9UIA9 1087 aaKnown RBP14.77□□□□□ -0.05
BRCA1-218ENST00000489037 HCN2Q9UL51 889 aa14.77□□□□□ -0.05
BRCA1-218ENST00000489037 LRRC53A6NM62 1247 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 ASLP04424 464 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 KRT3P12035 628 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 PDGFRAP16234 1089 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 SDC4P31431 198 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 RDXP35241 583 aaKnown RBP14.76□□□□□ -0.05
BRCA1-218ENST00000489037 FLT3P36888 993 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 IL12RB1P42701 662 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 CXCR3P49682 368 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 ST8SIA6P61647 398 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 LRRC31Q6UY01 552 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 IRF2BP2Q7Z5L9 587 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 PHLDB2Q86SQ0 1253 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 KBTBD6Q86V97 674 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 PHF13Q86YI8 300 aaPredicted RBP14.76□□□□□ -0.05
BRCA1-218ENST00000489037 DCLK2Q8N568 766 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 BAP1Q92560 729 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 NT5C3BQ969T7 300 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 IQCDQ96DY2 449 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 ZC3H10Q96K80 434 aaKnown RBP14.76□□□□□ -0.05
BRCA1-218ENST00000489037 PCDHB18PQ96TA0 734 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 TBCBQ99426 244 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 SIK2Q9H0K1 926 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 TSPY26PQ9H489 355 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 PIGVQ9NUD9 493 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 TMEM59LQ9UK28 342 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 USP18Q9UMW8 372 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 INVSQ9Y283 1065 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 RAD54BQ9Y620 910 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 CKAP5Q14008 2032 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 NUP205Q92621 2012 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 GVINP1Q7Z2Y8 2422 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 PLXND1Q9Y4D7 1925 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 GON4LQ3T8J9 2241 aa14.76□□□□□ -0.05
BRCA1-218ENST00000489037 A0A1B0GVM2 712 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 A0A1W2PQF6 199 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 TCAF2A6NFQ2 919 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 WASH3PC4AMC7 463 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 LRP3O75074 770 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 ZNF217O75362 1048 aa14.75□□□□□ -0.05
BRCA1-218ENST00000489037 PAGE1O75459 146 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms