RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 CAMTA2O94983 1202 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 SLU7O95391 586 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 VIPP01282 170 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 GASTP01350 101 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 GRPP07492 148 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 GNAI3P08754 354 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TMIGD3P0DMS9 266 aaPredicted RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 RPS2P15880 293 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TPH1P17752 444 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 HLA-DPA1P20036 260 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 AKT1P31749 480 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 ICAM3P32942 547 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 GP5P40197 560 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 ARL1P40616 181 aaPredicted RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 RBM5P52756 815 aaKnown RBP eCLIP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TPD52P55327 224 aaPredicted RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 HDAC4P56524 1084 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 PER3P56645 1201 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 C21orf58P58505 322 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 STARD6P59095 220 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 GNAI1P63096 354 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 NOMO3P69849 1222 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 MXRA7P84157 204 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TBL3Q12788 808 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 MYO1EQ12965 1108 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 SP140Q13342 867 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TRIM29Q14134 588 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 SEMA3AQ14563 771 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 EIF4HQ15056 248 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 PPP2R5BQ15173 497 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TYSND1Q2T9J0 566 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 ZNF750Q32MQ0 723 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 CBWD5Q5RIA9 395 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 MANEALQ5VSG8 457 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 FNDC7Q5VTL7 733 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TRIM68Q6AZZ1 485 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 ADALQ6DHV7 355 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 ABLIM2Q6H8Q1 611 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 WDR73Q6P4I2 378 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 NCEH1Q6PIU2 408 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TRAT1Q6PIZ9 186 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 CCDC186Q7Z3E2 898 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 KIAA2013Q8IYS2 634 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TRIML1Q8N9V2 468 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 UTP15Q8TED0 518 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 GRK7Q8WTQ7 553 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 WDR60Q8WVS4 1066 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 ZNF606Q8WXB4 792 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 DDX17Q92841 729 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 FAM162AQ96A26 154 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 VPS33AQ96AX1 596 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 SLC22A18Q96BI1 424 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 ELP4Q96EB1 424 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 CCDC43Q96MW1 224 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 SLX1AQ9BQ83 275 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 MESP1Q9BRJ9 268 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 NUDT22Q9BRQ3 303 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 ANKRD2Q9GZV1 360 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 MS4A7Q9GZW8 240 aaPredicted RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 BRD8Q9H0E9 1235 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 C11orf54Q9H0W9 315 aaPredicted RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 VPS33BQ9H267 617 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 TAOK3Q9H2K8 898 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 SLC35C2Q9NQQ7 365 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 SLC2A4RGQ9NR83 387 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 SNX15Q9NRS6 342 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 BEX4Q9NWD9 120 aaPredicted RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 GPRC5DQ9NZD1 345 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 PTGFRNQ9P2B2 879 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 SUCLA2Q9P2R7 463 aaPredicted RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 DNMT3BQ9UBC3 853 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 XPR1Q9UBH6 696 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 SARDHQ9UL12 918 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 CORO1CQ9ULV4 474 aaPredicted RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 NFU1Q9UMS0 254 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 RRP15Q9Y3B9 282 aaKnown RBP3.64□□□□□ -1.83
PRPF4-203ENST00000488937 ACTL7AQ9Y615 435 aa3.64□□□□□ -1.83
PRPF4-203ENST00000488937 GOLGA6L10A0A0M3HER8 536 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 A0A0U1RQK1 487 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 ZNF320A2RRD8 509 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 GLOD5A6NK44 160 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 FAM90A7PA6NKC0 464 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 AQP7P3A6NL99 342 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 FAM90A22PA8MWA6 464 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 FAM90A12PA8MX19 464 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 FAM90A23PA8MXZ1 464 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 TMEM232C9JQI7 657 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 H7C4K7 107 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 NDC80O14777 642 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 TSPAN4O14817 238 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 PSMA7O14818 248 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 BCAT2O15382 392 aaPredicted RBP3.63□□□□□ -1.83
PRPF4-203ENST00000488937 TEX33O43247 280 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 RRP9O43818 475 aaKnown RBP3.63□□□□□ -1.83
PRPF4-203ENST00000488937 CDC14BO60729 498 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 KINO60870 393 aaKnown RBP3.63□□□□□ -1.83
PRPF4-203ENST00000488937 SOCS5O75159 536 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 SEC22BO75396 215 aa3.63□□□□□ -1.83
PRPF4-203ENST00000488937 C22orf31O95567 290 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms