RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 RAP1GAP2Q684P5 730 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 ALKBH5Q6P6C2 394 aaKnown RBP19.31■□□□□ 0.68
PTCD3-217ENST00000488801 C1orf210Q8IVY1 113 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 WFDC5Q8TCV5 224 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 USP33Q8TEY7 942 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 DDI1Q8WTU0 396 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 BHMTQ93088 406 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 ZNF653Q96CK0 615 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 TMA16Q96EY4 203 aaKnown RBP19.31■□□□□ 0.68
PTCD3-217ENST00000488801 CHP1Q99653 195 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 C2orf42Q9NWW7 574 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 CNOT8Q9UFF9 292 aaKnown RBP19.31■□□□□ 0.68
PTCD3-217ENST00000488801 ARIH1Q9Y4X5 557 aaPredicted RBP19.31■□□□□ 0.68
PTCD3-217ENST00000488801 PAXBP1Q9Y5B6 917 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 HS3ST4Q9Y661 456 aa19.31■□□□□ 0.68
PTCD3-217ENST00000488801 TNRC6BQ9UPQ9 1833 aaKnown RBP19.3■□□□□ 0.68
PTCD3-217ENST00000488801 TMEM191CA6NGB0 347 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 CCP110O43303 1012 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 TSPAN3O60637 253 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 TNFRSF4P43489 277 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 RPS24P62847 133 aaKnown RBP19.3■□□□□ 0.68
PTCD3-217ENST00000488801 ATP11AP98196 1134 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 PREPLQ4J6C6 727 aaPredicted RBP19.3■□□□□ 0.68
PTCD3-217ENST00000488801 CHSY1Q86X52 802 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 NTAN1Q96AB6 310 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 CNPY3Q9BT09 278 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.3■□□□□ 0.68
PTCD3-217ENST00000488801 TKTL2Q9H0I9 626 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 WDCPQ9H6R7 721 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 SLC12A6Q9UHW9 1150 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 SCINQ9Y6U3 715 aa19.3■□□□□ 0.68
PTCD3-217ENST00000488801 PRRT4C9JH25 899 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 CYP1A2P05177 515 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 HLA-FP30511 346 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 NRG1Q02297 640 aaPredicted RBP19.29■□□□□ 0.68
PTCD3-217ENST00000488801 GFPT1Q06210 699 aaPredicted RBP19.29■□□□□ 0.68
PTCD3-217ENST00000488801 SCAPQ12770 1279 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 CDO1Q16878 200 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 ACBD5Q5T8D3 534 aaPredicted RBP19.29■□□□□ 0.68
PTCD3-217ENST00000488801 TTC39BQ5VTQ0 682 aaPredicted RBP19.29■□□□□ 0.68
PTCD3-217ENST00000488801 FBXL22Q6P050 247 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 SND1Q7KZF4 910 aaKnown RBP eCLIP19.29■□□□□ 0.68
PTCD3-217ENST00000488801 FAM131BQ86XD5 332 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 LGI2Q8N0V4 545 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 FAM172AQ8WUF8 416 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 NELL1Q92832 810 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 HAPLN3Q96S86 360 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 TRIM7Q9C029 511 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 THAP2Q9H0W7 228 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 TMPRSS4Q9NRS4 437 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 HCN4Q9Y3Q4 1203 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 VPS13AQ96RL7 3174 aa19.29■□□□□ 0.68
PTCD3-217ENST00000488801 IGLV3-10A0A075B6K4 115 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 ANKRD62A6NC57 917 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 F5H5T6 163 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 TBL1XO60907 577 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 COL9A1P20849 921 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 IRAK1P51617 712 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 CCR3P51677 355 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 MRPS21P82921 87 aaKnown RBP19.28■□□□□ 0.68
PTCD3-217ENST00000488801 AUHQ13825 339 aaKnown RBP19.28■□□□□ 0.68
PTCD3-217ENST00000488801 ANGPT1Q15389 498 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 GEN1Q17RS7 908 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 HSF5Q4G112 596 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-217ENST00000488801 MANEALQ5VSG8 457 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 ANKS1BQ7Z6G8 1248 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 ZNF557Q8N988 423 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-217ENST00000488801 RPLP0P6Q8NHW5 317 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 CCDC26Q8TAB7 109 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 FIBINQ8TAL6 211 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 KCNV2Q8TDN2 545 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 RNF34Q969K3 372 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 IGSF8Q969P0 613 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 C1orf74Q96LT6 269 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 NHEJ1Q9H9Q4 299 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-217ENST00000488801 SPATA6Q9NWH7 488 aaPredicted RBP19.28■□□□□ 0.68
PTCD3-217ENST00000488801 ZNHIT6Q9NWK9 470 aaKnown RBP19.28■□□□□ 0.68
PTCD3-217ENST00000488801 FBXO4Q9UKT5 387 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 NEU3Q9UQ49 428 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 MYO15AQ9UKN7 3530 aa19.28■□□□□ 0.68
PTCD3-217ENST00000488801 DMDP11532 3685 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 SHROOM3Q8TF72 1996 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 A0A1B0GVM2 712 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 TCAF2A6NFQ2 919 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 K7ESF4 209 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 LUC7L3O95232 432 aaKnown RBP19.27■□□□□ 0.68
PTCD3-217ENST00000488801 GGCXP38435 758 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 GALCP54803 685 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 SATB1Q01826 763 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 EIF4HQ15056 248 aaKnown RBP19.27■□□□□ 0.68
PTCD3-217ENST00000488801 ZNF528Q3MIS6 628 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 CCDC122Q5T0U0 273 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 C10orf76Q5T2E6 689 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 TMEM215Q68D42 235 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 DCUN1D2Q6PH85 259 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 C14orf80Q86SX3 495 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 ARFGAP1Q8N6T3 406 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 CCDC185Q8N715 623 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 IL17RCQ8NAC3 791 aa19.27■□□□□ 0.68
PTCD3-217ENST00000488801 ARHGEF26Q96DR7 871 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms