RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 USP18Q9UMW8 372 aa12.12□□□□□ -0.47
CEACAM1-212ENST00000488639 COL4A3Q01955 1670 aa12.12□□□□□ -0.47
CEACAM1-212ENST00000488639 VCANP13611 3396 aa12.12□□□□□ -0.47
CEACAM1-212ENST00000488639 IGLV3-10A0A075B6K4 115 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 ZSCAN12O43309 604 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 NARSO43776 548 aaKnown RBP12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 CACNG3O60359 315 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 KRT7P08729 469 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 ARSAP15289 507 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 TACR2P21452 398 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 MIPP30301 263 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 L1CAMP32004 1257 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 OXCT1P55809 520 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 SIGLEC14Q08ET2 396 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 E2F5Q15329 346 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 MLF2Q15773 248 aaPredicted RBP12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 SLC44A4Q53GD3 710 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 LRRC38Q5VT99 294 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 TRIM68Q6AZZ1 485 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 NADSYN1Q6IA69 706 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 SCYL2Q6P3W7 929 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 RHBDF2Q6PJF5 856 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 VSIG1Q86XK7 387 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 CCDC117Q8IWD4 279 aaPredicted RBP12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 SYCE1Q8N0S2 351 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 CCDC26Q8TAB7 109 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 TMA16Q96EY4 203 aaKnown RBP12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 DESI2Q9BSY9 194 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 BBS2Q9BXC9 721 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 TRIM7Q9C029 511 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 ARHGEF3Q9NR81 526 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 GTSE1Q9NYZ3 720 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 OR12D3Q9UGF7 316 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 FZD10Q9ULW2 581 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 MRPS17Q9Y2R5 130 aaKnown RBP12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 HS3ST4Q9Y661 456 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 TTC28Q96AY4 2481 aa12.11□□□□□ -0.47
CEACAM1-212ENST00000488639 MIA3Q5JRA6 1907 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 RCCD1A6NED2 376 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 SPECC1L-ADORA2AF8WAN1 911 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 CLDN11O75508 207 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 TYRP14679 529 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 SLC6A4P31645 630 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 CTHP32929 405 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 GJA4P35212 333 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 ATXN1P54253 815 aaKnown RBP12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 SLC25A11Q02978 314 aaKnown RBP12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 TNK2Q07912 1038 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 AUHQ13825 339 aaKnown RBP12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 MESDQ14696 234 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 ANO4Q32M45 955 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 FYB2Q5VWT5 728 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 RAP1GAP2Q684P5 730 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 ZNF852Q6ZMS4 543 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 CHST9Q7L1S5 443 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 TMEM25Q86YD3 366 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 ETFBKMTQ8IXQ9 262 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 ARFGAP1Q8N6T3 406 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 CCDC185Q8N715 623 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 ST13P5Q8NFI4 369 aaPredicted RBP12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 TPCN2Q8NHX9 752 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 DDI1Q8WTU0 396 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 NECAB3Q96P71 396 aaPredicted RBP12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 NELL2Q99435 816 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 EPAS1Q99814 870 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 LACRTQ9GZZ8 138 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 RCOR3Q9P2K3 495 aaPredicted RBP12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 FBXO10Q9UK96 956 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 FBXL21Q9UKT6 434 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 AP4E1Q9UPM8 1137 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 PPP2R2CQ9Y2T4 447 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 PIAS3Q9Y6X2 628 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 MYOFQ9NZM1 2061 aa12.1□□□□□ -0.47
CEACAM1-212ENST00000488639 A0A1B0GVM2 712 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 GOLGA6L9A6NEM1 432 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 TCAF2A6NFQ2 919 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 DRGXA6NNA5 263 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 ZNF487B1APH4 448 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 E9PAM4 449 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 NEDD8-MDP1E9PL57 170 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 PI4K2BG5E9Z4 385 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 TRDMT1O14717 391 aaKnown RBP12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 FGF10O15520 208 aaPredicted RBP12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 PSTPIP1O43586 416 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 BUB1BO60566 1050 aaPredicted RBP12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 HOXD9P28356 352 aaPredicted RBP12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 HOXC13P31276 330 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 HCAR3P49019 387 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 NAP1L1P55209 391 aaKnown RBP12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 CDH4P55283 916 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 STARD6P59095 220 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 SEMA3BQ13214 749 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 SLC12A1Q13621 1099 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 DPYSL2Q16555 572 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 MANEALQ5VSG8 457 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 FBXL22Q6P050 247 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 ZNF783Q6ZMS7 281 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 TPGS1Q6ZTW0 290 aa12.09□□□□□ -0.47
CEACAM1-212ENST00000488639 CYP4V2Q6ZWL3 525 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms