RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PSEN1P49768 467 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 SEMA3BQ13214 749 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 BRMS1LQ5PSV4 323 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 SDHAF4Q5VUM1 108 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 TPGS2Q68CL5 300 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 TMC3Q7Z5M5 1100 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 KRT222Q8N1A0 295 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 PYROXD2Q8N2H3 581 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 TSEN2Q8NCE0 465 aaKnown RBP13.14□□□□□ -0.31
NELFE-209ENST00000488426 RSAD2Q8WXG1 361 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 TMEM121Q9BTD3 319 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 LRFN3Q9BTN0 628 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 CRISPLD1Q9H336 500 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 CLIC5Q9NZA1 410 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 AFF4Q9UHB7 1163 aaKnown RBP13.14□□□□□ -0.31
NELFE-209ENST00000488426 MUTYHQ9UIF7 546 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 A0A1W2PQH9 124 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 ADAM12O43184 909 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 PPFIA2O75334 1257 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 SPATA31D3P0C874 917 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 GOT1P17174 413 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 OR1D2P34982 312 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 SLC20A2Q08357 652 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 DUSP4Q13115 394 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 XRCC4Q13426 336 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 TRIP13Q15645 432 aaPredicted RBP13.14□□□□□ -0.31
NELFE-209ENST00000488426 KCTD19Q17RG1 926 aaPredicted RBP13.14□□□□□ -0.31
NELFE-209ENST00000488426 C1orf228Q6PIY5 440 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 NPNTQ6UXI9 565 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 SPATA31D4Q6ZUB0 917 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 BZW1Q7L1Q6 419 aaKnown RBP13.14□□□□□ -0.31
NELFE-209ENST00000488426 RNF135Q8IUD6 432 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 FBXO32Q969P5 355 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 SERPINB11Q96P15 392 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 TXLNGYQ9BZA5 131 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 NMUR1Q9HB89 426 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 ARHGEF4Q9NR80 690 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 FAM50BQ9Y247 325 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 SLC27A5Q9Y2P5 690 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 TECTAO75443 2155 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 BCLAF3A2AJT9 711 aaKnown RBP13.13□□□□□ -0.31
NELFE-209ENST00000488426 GOLGA6BA6NDN3 693 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 EEF2KO00418 725 aaKnown RBP13.13□□□□□ -0.31
NELFE-209ENST00000488426 TEX28O15482 410 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 URODP06132 367 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 RPL17P18621 184 aaKnown RBP13.13□□□□□ -0.31
NELFE-209ENST00000488426 COL9A1P20849 921 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 CLCN4P51793 760 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 USP46P62068 366 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 CBX2Q14781 532 aaPredicted RBP13.13□□□□□ -0.31
NELFE-209ENST00000488426 RARS2Q5T160 578 aaKnown RBP13.13□□□□□ -0.31
NELFE-209ENST00000488426 IZUMO3Q5VZ72 239 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 NCBP2-AS2Q69YL0 99 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 DARS2Q6PI48 645 aaKnown RBP13.13□□□□□ -0.31
NELFE-209ENST00000488426 RHBDF2Q6PJF5 856 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 CLSTN3Q9BQT9 956 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 TTLL2Q9BWV7 592 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 MAGEB5Q9BZ81 275 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 FOXP3Q9BZS1 431 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 TKTL2Q9H0I9 626 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 TLR8Q9NR97 1041 aaKnown RBP13.13□□□□□ -0.31
NELFE-209ENST00000488426 OLA1Q9NTK5 396 aaKnown RBP13.13□□□□□ -0.31
NELFE-209ENST00000488426 ARHGEF38Q9NXL2 777 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 GMIPQ9P107 970 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 ANAPC5Q9UJX4 755 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 HEY1Q9Y5J3 304 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 DOCK6Q96HP0 2047 aa13.13□□□□□ -0.31
NELFE-209ENST00000488426 H7C0C1 242 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 DNALI1O14645 258 aaPredicted RBP13.12□□□□□ -0.31
NELFE-209ENST00000488426 TP73O15350 636 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 ZNF189O75820 626 aaPredicted RBP13.12□□□□□ -0.31
NELFE-209ENST00000488426 ABLIM3O94929 683 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 CHRM1P11229 460 aaPredicted RBP13.12□□□□□ -0.31
NELFE-209ENST00000488426 AMPD1P23109 780 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 CCR1P32246 355 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 ATP5OP48047 213 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 VPS41P49754 854 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 ITGA8P53708 1063 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 DHX9Q08211 1270 aaKnown RBP13.12□□□□□ -0.31
NELFE-209ENST00000488426 DPYSQ14117 519 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 PPP2R5DQ14738 602 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 SLMAPQ14BN4 828 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 CFAP58Q5T655 872 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 TMC5Q6UXY8 1006 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 CEP128Q6ZU80 1094 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 RFX8Q6ZV50 586 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 CDKL3Q8IVW4 592 aaPredicted RBP13.12□□□□□ -0.31
NELFE-209ENST00000488426 GLIS1Q8NBF1 620 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 ZNF461Q8TAF7 563 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 CASP10Q92851 521 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 RNF34Q969K3 372 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 RTP4Q96DX8 246 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 HAPLN3Q96S86 360 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 EPAS1Q99814 870 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 PHF7Q9BWX1 381 aaPredicted RBP13.12□□□□□ -0.31
NELFE-209ENST00000488426 OSBPL2Q9H1P3 480 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 ADAM7Q9H2U9 754 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 POMKQ9H5K3 350 aa13.12□□□□□ -0.31
NELFE-209ENST00000488426 MED4Q9NPJ6 270 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms