RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ARFGAP1Q8N6T3 406 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 FNIP1Q8TF40 1166 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 RFFLQ8WZ73 363 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 PBXIP1Q96AQ6 731 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 EIF3CQ99613 913 aaKnown RBP11.43□□□□□ -0.58
UBE4B-210ENST00000488228 MAGEB5Q9BZ81 275 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 SLC12A6Q9UHW9 1150 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 PCDHA13Q9Y5I0 950 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 CKAP5Q14008 2032 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 CACNA1IQ9P0X4 2223 aa11.43□□□□□ -0.58
UBE4B-210ENST00000488228 SHROOM3Q8TF72 1996 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 RCCD1A6NED2 376 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 PI15O43692 258 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 IPO7O95373 1038 aaKnown RBP11.42□□□□□ -0.58
UBE4B-210ENST00000488228 DCNP07585 359 aaKnown RBP11.42□□□□□ -0.58
UBE4B-210ENST00000488228 DESP17661 470 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 MIPP30301 263 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 GALK1P51570 392 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 AMPD2Q01433 879 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 TMEM196Q5HYL7 178 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
UBE4B-210ENST00000488228 FBXL22Q6P050 247 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 CYP4V2Q6ZWL3 525 aaPredicted RBP11.42□□□□□ -0.58
UBE4B-210ENST00000488228 ZNF683Q8IZ20 524 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 PYROXD2Q8N2H3 581 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 FBXL6Q8N531 539 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 TMEM105Q8N8V8 129 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 IGSF8Q969P0 613 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 NTAN1Q96AB6 310 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 TMA16Q96EY4 203 aaKnown RBP11.42□□□□□ -0.58
UBE4B-210ENST00000488228 RPRD1AQ96P16 312 aaPredicted RBP11.42□□□□□ -0.58
UBE4B-210ENST00000488228 DDX50Q9BQ39 737 aaKnown RBP11.42□□□□□ -0.58
UBE4B-210ENST00000488228 ARHGEF4Q9NR80 690 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 DEC1Q9P2X7 70 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 UVRAGQ9P2Y5 699 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 PCSK1NQ9UHG2 260 aa11.42□□□□□ -0.58
UBE4B-210ENST00000488228 MRPS17Q9Y2R5 130 aaKnown RBP11.42□□□□□ -0.58
UBE4B-210ENST00000488228 MUC6Q6W4X9 2439 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 EML5Q05BV3 1969 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 A0A0U1RQJ8 604 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 TYW5A2RUC4 315 aaKnown RBP11.41□□□□□ -0.58
UBE4B-210ENST00000488228 FAM170BA6NMN3 283 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.41□□□□□ -0.58
UBE4B-210ENST00000488228 E9PAM4 449 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 FAM72CH0Y354 149 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 LUC7L3O95232 432 aaKnown RBP11.41□□□□□ -0.58
UBE4B-210ENST00000488228 KAT7O95251 611 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 AOC1P19801 751 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 ADRA1BP35368 520 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 GJC1P36383 396 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 EIF2DP41214 584 aaKnown RBP11.41□□□□□ -0.58
UBE4B-210ENST00000488228 DGKGP49619 791 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 NUMBP49757 651 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 SEC13P55735 322 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 CCZ1BP86790 482 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 CCZ1P86791 482 aaPredicted RBP11.41□□□□□ -0.58
UBE4B-210ENST00000488228 SCAPQ12770 1279 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 GRSF1Q12849 480 aaKnown RBP eCLIP11.41□□□□□ -0.58
UBE4B-210ENST00000488228 CDH18Q13634 790 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 CCINQ13939 588 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 CA9Q16790 459 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 SMTNL2Q2TAL5 461 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 ARL13BQ3SXY8 428 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 EFHC2Q5JST6 749 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 TMEM31Q5JXX7 168 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 RABGAP1LQ5R372 815 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 C10orf76Q5T2E6 689 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 FAM72AQ5TYM5 149 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 RNF43Q68DV7 783 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 FAM72DQ6L9T8 149 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 C1orf228Q6PIY5 440 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 FAM72BQ86X60 149 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 MFN1Q8IWA4 741 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 CARNMT1Q8N4J0 409 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 NIPA2Q8N8Q9 360 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 TERB1Q8NA31 727 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 SLC35G2Q8TBE7 412 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 ATRIPQ8WXE1 791 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 XPO6Q96QU8 1125 aaKnown RBP11.41□□□□□ -0.58
UBE4B-210ENST00000488228 PNKPQ96T60 521 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 SNRNP25Q9BV90 132 aaKnown RBP11.41□□□□□ -0.58
UBE4B-210ENST00000488228 C1QTNF1Q9BXJ1 281 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 GOLPH3Q9H4A6 298 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 ZDHHC4Q9NPG8 344 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 IP6K2Q9UHH9 426 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 INTUQ9ULD6 942 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 AP4E1Q9UPM8 1137 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 NEU3Q9UQ49 428 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 NUP205Q92621 2012 aa11.41□□□□□ -0.58
UBE4B-210ENST00000488228 A0A1B0GVM2 712 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 TCAF2A6NFQ2 919 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 PRR33A8MZF0 331 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 MYO1FO00160 1098 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 PRPSAP2O60256 369 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 GPR37L1O60883 481 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 SRGAP2O75044 1071 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 RNF40O75150 1001 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 RNF8O76064 485 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 MTA2O94776 668 aa11.4□□□□□ -0.58
UBE4B-210ENST00000488228 CNTN5O94779 1100 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms