RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 DGKGP49619 791 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 NAP1L1P55209 391 aaKnown RBP16.27■□□□□ 0.2
C9orf3-219ENST00000488186 LRRC32Q14392 662 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 RAB6CQ53S08 254 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 EFHC2Q5JST6 749 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 FYB2Q5VWT5 728 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 TXNDC11Q6PKC3 985 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 LRRC8AQ8IWT6 810 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 CARNMT1Q8N4J0 409 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 ZNF557Q8N988 423 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-219ENST00000488186 CCDC26Q8TAB7 109 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 CHFRQ96EP1 664 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 BTBD6Q96KE9 485 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 C1orf74Q96LT6 269 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 FOXQ1Q9C009 403 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 RAB6CQ9H0N0 254 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 LTB4R2Q9NPC1 389 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 ARHGEF4Q9NR80 690 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 PCSK1NQ9UHG2 260 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 VANGL2Q9ULK5 521 aa16.27■□□□□ 0.2
C9orf3-219ENST00000488186 MIA3Q5JRA6 1907 aa16.27■□□□□ 0.19
C9orf3-219ENST00000488186 KMT2EQ8IZD2 1858 aa16.27■□□□□ 0.19
C9orf3-219ENST00000488186 CACNA1HO95180 2353 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 TBC1D3BA6NDS4 549 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 TMEM110-MUSTN1A8MSY1 372 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 H0Y626 953 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 TULP3O75386 442 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 PDGFBP01127 241 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-219ENST00000488186 PENKP01210 267 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-219ENST00000488186 AIF1P55008 147 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 KDSRQ06136 332 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 MESDQ14696 234 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 HADHQ16836 314 aaKnown RBP16.26■□□□□ 0.19
C9orf3-219ENST00000488186 DGKKQ5KSL6 1271 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 MPP7Q5T2T1 576 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 TTC39BQ5VTQ0 682 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-219ENST00000488186 CFAP52Q8N1V2 620 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 RFFLQ8WZ73 363 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 SLC2A11Q9BYW1 496 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 LMAN1LQ9HAT1 526 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 TMPRSS4Q9NRS4 437 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 OR12D3Q9UGF7 316 aa16.26■□□□□ 0.19
C9orf3-219ENST00000488186 SHISA7A6NL88 538 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 ARHGAP6O43182 974 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 CACNG3O60359 315 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 KAT7O95251 611 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 MIPP30301 263 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 AVPR2P30518 371 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 PCK1P35558 622 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 GGCXP38435 758 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 OPRD1P41143 372 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 GRIA2P42262 883 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 ARHGAP25P42331 645 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 RPS24P62847 133 aaKnown RBP16.25■□□□□ 0.19
C9orf3-219ENST00000488186 CDH18Q13634 790 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 ERMARDQ5T6L9 678 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 CWF19L1Q69YN2 538 aaKnown RBP16.25■□□□□ 0.19
C9orf3-219ENST00000488186 FBXL22Q6P050 247 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 C12orf40Q86WS4 652 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 TMEM139Q8IV31 216 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 MFN1Q8IWA4 741 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 CCDC185Q8N715 623 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 ACRBPQ8NEB7 543 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 PJA1Q8NG27 643 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 NTAN1Q96AB6 310 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 PRMT1Q99873 361 aaKnown RBP16.25■□□□□ 0.19
C9orf3-219ENST00000488186 OSBPL2Q9H1P3 480 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 OSGEPQ9NPF4 335 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 FZD10Q9ULW2 581 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 USP18Q9UMW8 372 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 SNX10Q9Y5X0 201 aa16.25■□□□□ 0.19
C9orf3-219ENST00000488186 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-219ENST00000488186 E9PAM4 449 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 TARSP26639 723 aaKnown RBP16.24■□□□□ 0.19
C9orf3-219ENST00000488186 HOXD9P28356 352 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-219ENST00000488186 SGSHP51688 502 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 ZNF252P-AS1Q0IIN9 211 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 KIF5AQ12840 1032 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 ZNF177Q13360 481 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-219ENST00000488186 GAB4Q2WGN9 574 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 FBXO43Q4G163 708 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 BOLA3Q53S33 107 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 TMEM196Q5HYL7 178 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 ZFYVE27Q5T4F4 411 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 RWDD4Q6NW29 188 aaKnown RBP16.24■□□□□ 0.19
C9orf3-219ENST00000488186 MAMSTRQ6ZN01 415 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 C14orf80Q86SX3 495 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 ETFBKMTQ8IXQ9 262 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 ZNF687Q8N1G0 1237 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 NIPA2Q8N8Q9 360 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 CLDN23Q96B33 292 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 PRICKLE1Q96MT3 831 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-219ENST00000488186 EPAS1Q99814 870 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 IER2Q9BTL4 223 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 ZWILCHQ9H900 591 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 ANLNQ9NQW6 1124 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 MTF2Q9Y483 593 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-219ENST00000488186 MUC6Q6W4X9 2439 aa16.24■□□□□ 0.19
C9orf3-219ENST00000488186 GFRA2O00451 464 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 CREB3O43889 395 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms